Detailed information    

insolico Bioinformatically predicted

Overview

Name   rexA   Type   Machinery gene
Locus tag   SSA_RS07105 Genome accession   NC_009009
Coordinates   1452834..1456508 (-) Length   1224 a.a.
NCBI ID   WP_011837144.1    Uniprot ID   A3CNT9
Organism   Streptococcus sanguinis SK36     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1447834..1461508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS07080 (SSA_1446) hisD 1447988..1449280 (-) 1293 WP_002909411.1 histidinol dehydrogenase -
  SSA_RS07085 (SSA_1447) hisG 1449277..1449921 (-) 645 WP_002909409.1 ATP phosphoribosyltransferase -
  SSA_RS07090 (SSA_1448) - 1449918..1450907 (-) 990 WP_002909408.1 ATP phosphoribosyltransferase regulatory subunit -
  SSA_RS07095 (SSA_1449) hisC 1450963..1452021 (-) 1059 WP_011837142.1 histidinol-phosphate transaminase -
  SSA_RS07100 (SSA_1450) - 1452495..1452800 (-) 306 WP_011837143.1 DUF4298 domain-containing protein -
  SSA_RS07105 (SSA_1451) rexA 1452834..1456508 (-) 3675 WP_011837144.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  SSA_RS07110 (SSA_1452) rexB 1456505..1459786 (-) 3282 WP_011837145.1 ATP-dependent nuclease subunit B Machinery gene
  SSA_RS07115 (SSA_1453) - 1459987..1460298 (-) 312 WP_011837146.1 hypothetical protein -
  SSA_RS07120 (SSA_1454) - 1460345..1461190 (-) 846 WP_011837147.1 DUF4300 family protein -

Sequence

Protein


Download         Length: 1224 a.a.        Molecular weight: 139912.31 Da        Isoelectric Point: 4.9323

>NTDB_id=26305 SSA_RS07105 WP_011837144.1 1452834..1456508(-) (rexA) [Streptococcus sanguinis SK36]
MKRIPFLTAEEIALKQAQEAASDKPQKKTAEQIEAIYSSGRNILVSASAGSGKTFVMVQRIIDQILRGVAVSQLFISTFT
VKAAGELKERLEKELGQALKEAESPELKQHLAQQLADLPNADIGTMDSFTQKVLSRYGYLLGLAPNFRILQSASEQLILQ
NEVFSQVFDHYYDSERQALFSRLVKNFTGKRKDLSAFREQVYRIYSFLQSTSSPQRWLEETFLYGYEHSDFAAERERIFC
QIKSALWELETFFSAHLEHEGREFAGAKYQENVQDALTVLAGLNESSSIEETAQILKQIVALSQLSNGQAFTARVGKNAD
ELKKEMAKDYNEARKPMIERLRSFDQQLYQLDFIEQHQDECLPLVELLRDFVADFAQAYLERKKAENAFEFGDISHFAIE
ILETFPEVRRFYQERYHEVMVDEYQDTNHTQERMLDLLSRGKNRFMVGDIKQSIYRFRQADPQIFSDKFKAYQEDSSQGK
LIVLKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPAKREPNPANRASFLIYEGSKESPEEEADEGLPQA
VSAGEVDLVIKEIIRLHNEEGVAFKDITLLTASRTRNDLILAAFEQHQIPLVPDDGAANYLQSVEVLVMLDTLRTINNPL
NDYALTALLKSPMFDFGEDELARLSLQASQERSQENLYEKLVNALEGRGLNPALVTEELQKKLQHFYETLQSWRTYSKTH
SLYDLIWKIYQDRFYYDMVGTLVNGAQRQANLYALSLRANEYEKSSFKGLSRFIGMIDRILENQHDLASVPVAAPKDAVR
LMTIHKSKGLEFKYVFLLNMDKAFNRQDSSSAIILSRTKGVGIKYVADVSVSVKDSYAPNQLRISMDTLPYQQNLAELQL
ASLSEQMRLLYVAMTRAETKLYLVGKGSQEALDKRQWGKSQQGRLSASLRSQISNFQDWLYAIQDVFSDENLAYETRFVT
DEELTAEEIGRINEPVLFPADDLADNRQSDDIRRALDILESVDRLNSQYRSAIELPSVRTPSQIKKFYEPIMDTDGLDIM
DERAAFRPQPSFELPDFGKKAKVTGAQVGSAVHELMQRIPLDSSPSMAVLRSALAQVQADDAVKKQIQLSKIASFFETDL
GRLLIENSDRVRREAPFAMLKRDEASGQEFVLRGILDGYLLFEDRIILFDYKTDKYKDSSELIARYRGQLDLYAQALSRS
YGISQIEKYLILLGGEQLQVVKVD

Nucleotide


Download         Length: 3675 bp        

>NTDB_id=26305 SSA_RS07105 WP_011837144.1 1452834..1456508(-) (rexA) [Streptococcus sanguinis SK36]
ATGAAGAGAATTCCTTTTTTAACTGCAGAAGAAATTGCTCTTAAGCAAGCCCAAGAAGCTGCTTCGGACAAGCCACAGAA
AAAGACGGCAGAGCAGATTGAAGCCATCTACTCCTCTGGCCGGAATATTCTGGTCTCTGCTTCGGCCGGCTCGGGTAAGA
CTTTTGTCATGGTCCAGCGGATTATCGACCAGATTCTTAGAGGTGTTGCTGTCAGCCAGCTCTTTATTTCGACCTTTACG
GTCAAGGCGGCAGGCGAGCTAAAAGAGAGGCTGGAGAAGGAACTGGGCCAGGCCTTGAAAGAGGCCGAGAGTCCTGAACT
CAAGCAACATTTGGCCCAGCAATTAGCTGACTTGCCCAATGCTGACATTGGCACCATGGACTCCTTTACCCAGAAAGTGC
TTAGTCGCTATGGTTACCTGCTTGGTTTGGCACCGAATTTTCGGATTCTCCAGTCTGCCAGTGAGCAGCTGATTCTGCAA
AATGAAGTCTTTAGCCAAGTGTTTGACCATTACTATGACAGCGAGCGTCAGGCTTTGTTTAGCCGTTTGGTTAAGAATTT
TACTGGTAAGCGGAAGGATTTATCAGCTTTCCGGGAGCAAGTTTATCGGATTTACAGCTTTCTACAGTCAACCAGCAGTC
CTCAGCGCTGGCTGGAGGAAACCTTCCTCTATGGCTATGAGCACAGTGACTTTGCAGCAGAGAGAGAGCGGATATTTTGT
CAAATCAAATCAGCCCTTTGGGAGCTGGAAACCTTCTTTTCTGCCCATCTGGAGCATGAAGGAAGAGAATTTGCAGGTGC
TAAATATCAGGAAAATGTCCAAGATGCTTTGACCGTCTTAGCAGGCCTGAATGAGTCGTCATCGATAGAAGAAACAGCTC
AGATTCTCAAGCAGATCGTGGCCCTTTCCCAACTGTCCAATGGCCAAGCCTTTACAGCACGGGTTGGCAAGAATGCAGAC
GAGCTCAAAAAAGAGATGGCCAAGGATTACAATGAAGCTAGGAAGCCTATGATTGAGCGGCTGCGAAGCTTTGACCAGCA
GCTTTATCAGCTGGACTTTATCGAGCAGCACCAGGATGAGTGCCTGCCTCTGGTTGAGCTTCTGCGGGATTTTGTGGCGG
ACTTTGCACAGGCTTATTTGGAGCGTAAGAAGGCAGAAAATGCCTTTGAATTTGGTGATATCAGCCATTTTGCTATTGAG
ATTTTAGAGACTTTTCCAGAGGTACGTCGCTTTTATCAGGAGCGCTACCACGAGGTCATGGTGGATGAGTATCAGGATAC
CAACCACACACAGGAGCGCATGCTGGACTTGCTTTCCAGAGGGAAAAATCGCTTTATGGTGGGGGATATCAAGCAGTCTA
TCTACCGTTTCCGTCAAGCTGACCCGCAGATTTTCAGTGATAAGTTTAAGGCCTATCAAGAGGATAGTAGTCAGGGCAAG
CTAATCGTCCTTAAGGAAAATTTCCGGAGTCATCTTGAGGTGCTGGAAGCAACCAACGATGTTTTCAAACGCCTGATGGA
TGAAGAAGTTGGGGAAATTGACTACAATGAAACCCACTATCTGGTGGCTGGCAATCCAGCTAAACGTGAGCCTAATCCAG
CTAACCGCGCTTCCTTCTTAATCTATGAAGGCTCCAAGGAGAGTCCGGAAGAGGAGGCTGATGAAGGCTTGCCACAGGCA
GTATCAGCTGGGGAAGTGGACCTAGTCATCAAGGAAATCATCCGCCTGCACAATGAAGAAGGAGTGGCTTTTAAAGATAT
TACGCTACTGACAGCATCCAGAACCCGCAATGATTTGATTTTAGCTGCCTTTGAGCAGCACCAGATTCCGCTGGTACCAG
ATGATGGCGCCGCAAACTATCTGCAGTCAGTAGAGGTATTGGTCATGCTAGACACCCTGCGGACCATCAATAATCCTCTG
AATGACTATGCCCTGACCGCCCTTCTCAAGTCTCCTATGTTTGACTTTGGTGAGGACGAGCTGGCTCGGCTGTCCCTGCA
GGCCAGTCAAGAGCGTTCTCAAGAAAATCTTTATGAAAAGCTGGTTAATGCCCTTGAAGGTAGAGGTTTGAATCCTGCTT
TAGTCACTGAGGAACTGCAGAAAAAATTGCAGCATTTCTATGAGACTCTGCAAAGCTGGCGGACTTATTCCAAGACGCAT
TCCCTGTATGATTTGATTTGGAAGATTTATCAGGACCGTTTCTACTATGACATGGTGGGAACTCTAGTCAATGGTGCCCA
GAGACAGGCCAATCTCTATGCCCTCTCTTTGCGGGCAAATGAGTATGAAAAGTCCAGCTTTAAAGGCTTGTCTCGCTTTA
TTGGGATGATAGACCGTATCTTGGAAAATCAGCATGATCTAGCCAGTGTGCCAGTGGCAGCGCCTAAGGACGCCGTTCGT
CTCATGACCATTCATAAGAGTAAGGGGCTGGAGTTCAAATACGTCTTCCTGCTCAATATGGACAAGGCCTTCAACCGTCA
GGATAGTAGCTCTGCTATTATCCTTAGCCGGACCAAGGGAGTCGGCATCAAGTATGTGGCGGATGTATCGGTGTCTGTGA
AAGATTCCTATGCACCGAATCAGCTGCGTATTTCCATGGATACGCTGCCTTATCAGCAGAATTTAGCAGAGCTGCAATTG
GCTAGTTTGTCTGAGCAAATGCGTTTGCTTTATGTGGCCATGACGCGGGCTGAAACCAAGCTCTATCTGGTCGGCAAGGG
CAGTCAAGAGGCCTTGGATAAGCGTCAGTGGGGCAAGAGCCAGCAAGGGCGTTTGTCTGCCAGTCTGCGCAGCCAAATCA
GCAATTTCCAAGACTGGCTCTATGCCATTCAGGATGTTTTTTCTGATGAGAATCTTGCCTACGAGACCCGTTTTGTTACT
GATGAGGAGCTAACTGCTGAAGAGATAGGGCGAATTAATGAGCCTGTGCTCTTTCCCGCGGATGATTTGGCAGATAATCG
TCAGTCGGACGACATCCGTCGGGCTCTGGATATTTTAGAAAGCGTGGATCGGCTGAATAGTCAGTATCGCTCTGCTATTG
AGCTGCCTAGTGTGCGAACTCCAAGCCAGATTAAGAAGTTTTATGAGCCAATCATGGATACGGATGGCCTGGATATCATG
GATGAGCGAGCAGCTTTTCGGCCTCAGCCCAGCTTTGAGTTGCCTGATTTTGGCAAGAAAGCCAAAGTGACTGGGGCTCA
AGTCGGCAGTGCTGTTCATGAACTCATGCAGCGTATTCCTTTGGATAGCAGTCCTAGCATGGCTGTACTTCGTTCTGCCT
TGGCTCAGGTTCAGGCTGATGACGCAGTCAAAAAGCAGATTCAGCTGTCTAAGATTGCATCTTTCTTTGAGACGGATTTG
GGACGCCTCTTGATTGAGAACAGTGACAGAGTTCGTCGAGAAGCACCATTTGCCATGCTCAAGAGAGATGAAGCTAGTGG
TCAGGAATTTGTTTTGCGGGGGATTTTGGATGGTTACCTGCTCTTTGAGGACCGAATCATTCTCTTTGATTACAAGACGG
ATAAATATAAAGATTCATCTGAGTTGATTGCTCGCTATCGTGGCCAGCTAGACTTATATGCTCAAGCTCTCAGCCGTTCT
TATGGCATTTCGCAGATTGAAAAATATTTGATTCTGCTTGGCGGTGAGCAGCTGCAGGTAGTTAAGGTGGATTGA

Domains

Predicted by InterProScan.

UvrD-like helicase C-terminal domain (UvrD_C)

(482-903)

PD-(D/E)XK nuclease superfamily (PDDEXK_1)

(1064-1200)

UvrD/REP helicase N-terminal domain (UvrD-helicase)

(29-472)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3CNT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

58.463

99.918

0.584

Multiple sequence alignment