Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | C0J00_RS08690 | Genome accession | NZ_CP025536 |
| Coordinates | 1713024..1713512 (-) | Length | 162 a.a. |
| NCBI ID | WP_104968488.1 | Uniprot ID | A0A2L0D669 |
| Organism | Streptococcus pluranimalium strain TH11417 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1708024..1718512
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0J00_RS08670 (C0J00_08675) | - | 1709075..1709746 (+) | 672 | WP_104968485.1 | DUF1129 domain-containing protein | - |
| C0J00_RS08675 (C0J00_08680) | - | 1709892..1711184 (-) | 1293 | WP_104968486.1 | CitMHS family transporter | - |
| C0J00_RS08680 (C0J00_08685) | - | 1711194..1712195 (-) | 1002 | WP_104968487.1 | isocitrate/isopropylmalate dehydrogenase family protein | - |
| C0J00_RS08685 (C0J00_08690) | rpsR | 1712747..1712986 (-) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| C0J00_RS08690 (C0J00_08695) | ssb | 1713024..1713512 (-) | 489 | WP_104968488.1 | single-stranded DNA-binding protein | Machinery gene |
| C0J00_RS08695 (C0J00_08700) | rpsF | 1713524..1713814 (-) | 291 | WP_104968489.1 | 30S ribosomal protein S6 | - |
| C0J00_RS08705 (C0J00_08710) | - | 1715262..1715687 (+) | 426 | WP_158667329.1 | hypothetical protein | - |
| C0J00_RS08710 (C0J00_08715) | mutY | 1715743..1716891 (+) | 1149 | WP_104968491.1 | A/G-specific adenine glycosylase | - |
| C0J00_RS08715 (C0J00_08720) | - | 1716924..1717568 (-) | 645 | WP_199773966.1 | HAD family hydrolase | - |
Sequence
Protein
Download Length: 162 a.a. Molecular weight: 17971.63 Da Isoelectric Point: 4.7187
>NTDB_id=262371 C0J00_RS08690 WP_104968488.1 1713024..1713512(-) (ssb) [Streptococcus pluranimalium strain TH11417]
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSQSSYNGGGYNNQSSNDAFSSSSQTPNFGRDESPFGNSNPMDISDDDL
PF
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSQSSYNGGGYNNQSSNDAFSSSSQTPNFGRDESPFGNSNPMDISDDDL
PF
Nucleotide
Download Length: 489 bp
>NTDB_id=262371 C0J00_RS08690 WP_104968488.1 1713024..1713512(-) (ssb) [Streptococcus pluranimalium strain TH11417]
ATGATTAATAATGTAGTACTTGTTGGTCGTATGACCAGAGATGCAGAACTTCGTTACACACCGAGCAATGTAGCAGTAGC
TACTTTCTCTCTTGCAGTTAACCGTAACTTCAAGAGTCAAAACGGTGAACGTGAAGCTGATTTCATTAATTGTGTGATTT
GGCGCCAGCCAGCCGAGAATTTGGCTAACTGGGCTAAAAAAGGTGCCTTAATCGGTATCACTGGACGTATTCAGACGCGT
AATTATGAAAATCAACAAGGCCAACGTGTTTACGTAACAGAAGTTGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGTTCACAAAGTTCATACAATGGTGGTGGCTATAATAACCAATCATCAAACGATGCTTTCTCATCTT
CATCACAAACACCAAACTTTGGTCGAGACGAGAGCCCGTTTGGTAACTCAAACCCAATGGATATCTCAGATGACGATCTA
CCGTTCTAG
ATGATTAATAATGTAGTACTTGTTGGTCGTATGACCAGAGATGCAGAACTTCGTTACACACCGAGCAATGTAGCAGTAGC
TACTTTCTCTCTTGCAGTTAACCGTAACTTCAAGAGTCAAAACGGTGAACGTGAAGCTGATTTCATTAATTGTGTGATTT
GGCGCCAGCCAGCCGAGAATTTGGCTAACTGGGCTAAAAAAGGTGCCTTAATCGGTATCACTGGACGTATTCAGACGCGT
AATTATGAAAATCAACAAGGCCAACGTGTTTACGTAACAGAAGTTGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGTTCACAAAGTTCATACAATGGTGGTGGCTATAATAACCAATCATCAAACGATGCTTTCTCATCTT
CATCACAAACACCAAACTTTGGTCGAGACGAGAGCCCGTTTGGTAACTCAAACCCAATGGATATCTCAGATGACGATCTA
CCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60 |
100 |
0.63 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
53.591 |
100 |
0.599 |