Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   C0J00_RS02395 Genome accession   NZ_CP025536
Coordinates   472639..473718 (+) Length   359 a.a.
NCBI ID   WP_324761706.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain TH11417     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 467639..478718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS02365 (C0J00_02365) - 468186..468368 (+) 183 WP_104967393.1 DUF6440 family protein -
  C0J00_RS02370 (C0J00_02370) - 468822..469337 (+) 516 WP_104967394.1 GNAT family N-acetyltransferase -
  C0J00_RS02375 (C0J00_02375) - 469381..470478 (+) 1098 WP_104967395.1 MmcQ/YjbR family DNA-binding protein -
  C0J00_RS02380 (C0J00_02380) - 470632..471540 (-) 909 WP_104967396.1 diacylglycerol/lipid kinase family protein -
  C0J00_RS02385 (C0J00_02385) rsmD 471629..472168 (+) 540 WP_104967397.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  C0J00_RS02390 (C0J00_02390) coaD 472158..472658 (+) 501 WP_104967398.1 pantetheine-phosphate adenylyltransferase -
  C0J00_RS02395 (C0J00_02395) sepM 472639..473718 (+) 1080 WP_324761706.1 SepM family pheromone-processing serine protease Regulator
  C0J00_RS02400 (C0J00_02400) - 473982..474965 (+) 984 WP_104967399.1 LacI family DNA-binding transcriptional regulator -
  C0J00_RS02405 (C0J00_02405) rbsK 474958..475869 (+) 912 WP_104967400.1 ribokinase -
  C0J00_RS02410 (C0J00_02410) rbsD 475844..476242 (+) 399 WP_104967401.1 D-ribose pyranase -
  C0J00_RS02415 (C0J00_02415) - 476255..477733 (+) 1479 WP_104967402.1 sugar ABC transporter ATP-binding protein -
  C0J00_RS02420 (C0J00_02420) - 477735..478679 (+) 945 WP_160543729.1 ABC transporter permease subunit -

Sequence


Protein


Download         Length: 359 a.a.        Molecular weight: 39661.26 Da        Isoelectric Point: 5.3441

>NTDB_id=262343 C0J00_RS02395 WP_324761706.1 472639..473718(+) (sepM) [Streptococcus pluranimalium strain TH11417]
MNKQEFKVIEENPKKNSPLKWWLLGIGTAILLAVAFFLPLPYYIEMPGGAYDIRDVLEVDDKEDTAKGSYNFVAISQMQA
TPVALLYAWATPFTDISTSKESLGNYTEEEYIRLNQFYMETSQNEAIYQAFKLADKPVDLKYFGVYVLDVAKHSTFKGIL
GLADTVTGVNGKTFESSKELIDYVAKQKIGDKVTVQYLSDGKEKEASGKIIKLDNGKNGIGIGLVDHTEVETKTPVHFST
GNVGGPSAGLMFTLDILDQINEEDLRKGRMIAGTGTIEKDGSVGDIGGADKKVVSAAKDKAEIFFVPNNPLPKSYLKEHP
DAKTNYQEAKEAAKRIKTDMKIIPVKNVQDAIDYLKKTS

Nucleotide


Download         Length: 1080 bp        

>NTDB_id=262343 C0J00_RS02395 WP_324761706.1 472639..473718(+) (sepM) [Streptococcus pluranimalium strain TH11417]
GTGAACAAACAAGAATTTAAAGTCATTGAGGAAAACCCTAAAAAGAATTCCCCTTTAAAATGGTGGTTACTGGGAATTGG
AACAGCTATATTACTGGCTGTTGCCTTCTTTCTCCCACTGCCTTATTACATTGAAATGCCTGGGGGAGCCTATGATATTC
GTGATGTTTTAGAAGTTGATGACAAAGAAGATACAGCTAAAGGTTCTTATAATTTTGTCGCGATTTCTCAAATGCAGGCA
ACCCCGGTCGCTTTACTTTATGCTTGGGCAACTCCTTTTACCGATATTTCAACTTCTAAGGAAAGTTTGGGAAATTATAC
CGAAGAGGAGTACATTCGCCTCAATCAGTTTTATATGGAAACGTCACAAAATGAAGCGATCTACCAAGCTTTTAAATTAG
CTGACAAACCTGTAGACTTAAAATACTTCGGTGTTTATGTTTTGGATGTTGCTAAGCACTCTACTTTTAAAGGAATTCTA
GGTTTAGCAGATACTGTTACCGGTGTTAATGGTAAAACCTTTGAAAGTTCTAAGGAACTTATTGATTACGTTGCCAAACA
AAAGATTGGGGATAAGGTGACCGTACAATATTTATCTGATGGCAAAGAAAAAGAAGCTTCTGGTAAAATCATTAAGCTAG
ATAATGGCAAAAATGGGATTGGAATAGGACTCGTAGATCATACCGAAGTTGAAACAAAAACGCCAGTTCATTTTTCAACA
GGCAATGTTGGTGGACCGAGTGCAGGTCTTATGTTTACCTTGGATATTCTAGATCAAATCAATGAAGAAGATTTGAGAAA
AGGACGTATGATTGCAGGTACTGGAACGATTGAAAAAGACGGTTCAGTCGGTGATATTGGTGGTGCGGATAAGAAGGTTG
TTTCAGCAGCTAAAGATAAGGCTGAGATTTTCTTTGTTCCAAACAATCCCCTCCCAAAATCTTATTTGAAAGAACACCCA
GATGCTAAAACCAATTATCAGGAAGCCAAAGAAGCTGCTAAGCGTATCAAGACGGACATGAAAATTATTCCAGTCAAGAA
TGTTCAGGATGCGATTGACTACTTGAAAAAAACGTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.826

95.822

0.621


Multiple sequence alignment