Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LLG50_RS10720 | Genome accession | NZ_CP025500 |
| Coordinates | 2171082..2171378 (-) | Length | 98 a.a. |
| NCBI ID | WP_033900709.1 | Uniprot ID | A0A0H1RKN4 |
| Organism | Lactococcus lactis subsp. lactis strain G50 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2166082..2176378
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLG50_RS10685 (LLG50_10685) | - | 2166373..2167239 (+) | 867 | WP_103055167.1 | RluA family pseudouridine synthase | - |
| LLG50_RS10690 (LLG50_10690) | - | 2167277..2168086 (-) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| LLG50_RS10695 (LLG50_10695) | - | 2168079..2168816 (-) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| LLG50_RS10700 (LLG50_10700) | - | 2168993..2169835 (-) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| LLG50_RS10705 (LLG50_10705) | - | 2169832..2170269 (-) | 438 | WP_010906313.1 | zinc-dependent MarR family transcriptional regulator | - |
| LLG50_RS10710 (LLG50_10710) | comGG | 2170350..2170634 (-) | 285 | WP_017865155.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LLG50_RS10715 (LLG50_10715) | comGF | 2170673..2171119 (-) | 447 | WP_058203710.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LLG50_RS10720 (LLG50_10720) | comGE | 2171082..2171378 (-) | 297 | WP_033900709.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LLG50_RS10725 (LLG50_10725) | comGD | 2171350..2171781 (-) | 432 | WP_103055168.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LLG50_RS10730 (LLG50_10730) | comGC | 2171741..2172124 (-) | 384 | WP_012898622.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LLG50_RS10735 (LLG50_10735) | comGB | 2172138..2173211 (-) | 1074 | WP_080735950.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LLG50_RS10740 (LLG50_10740) | comGA | 2173105..2174043 (-) | 939 | WP_033900707.1 | competence type IV pilus ATPase ComGA | Machinery gene |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11048.89 Da Isoelectric Point: 5.6957
>NTDB_id=262114 LLG50_RS10720 WP_033900709.1 2171082..2171378(-) (comGE) [Lactococcus lactis subsp. lactis strain G50]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMQLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMQLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=262114 LLG50_RS10720 WP_033900709.1 2171082..2171378(-) (comGE) [Lactococcus lactis subsp. lactis strain G50]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCATTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCAACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCATTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCAACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
67.01 |
98.98 |
0.663 |