Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CYK55_RS07990 Genome accession   NZ_CP025473
Coordinates   1634470..1635738 (-) Length   422 a.a.
NCBI ID   WP_126134156.1    Uniprot ID   -
Organism   Enterococcus mundtii strain Pe161     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629470..1640738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CYK55_RS07985 (CYK55_08020) - 1632702..1634411 (-) 1710 WP_010735191.1 proline--tRNA ligase -
  CYK55_RS07990 (CYK55_08025) eeP 1634470..1635738 (-) 1269 WP_126134156.1 RIP metalloprotease RseP Regulator
  CYK55_RS07995 (CYK55_08030) - 1635937..1636737 (-) 801 WP_126134157.1 phosphatidate cytidylyltransferase -
  CYK55_RS08000 (CYK55_08035) - 1636734..1637540 (-) 807 WP_065095888.1 isoprenyl transferase -
  CYK55_RS08005 (CYK55_08040) frr 1637722..1638279 (-) 558 WP_023519849.1 ribosome recycling factor -
  CYK55_RS08010 (CYK55_08045) pyrH 1638283..1639005 (-) 723 WP_010735186.1 UMP kinase -
  CYK55_RS08015 (CYK55_08050) tsf 1639239..1640120 (-) 882 WP_126134158.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46058.63 Da        Isoelectric Point: 4.8150

>NTDB_id=261842 CYK55_RS07990 WP_126134156.1 1634470..1635738(-) (eeP) [Enterococcus mundtii strain Pe161]
MRTIITFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLMDSDHVVKKINLSKKIQLTNAIPMELIRYDLDEALTITGYVNGDETQEVTYAVNHDASIIEADGTELRIAPRD
VQFQSAKLWQRMLTNFAGPMNNFILAILLFIILAFMQGGVTVTNTNQIGVVTPDGAAAAAGLKENDEILSVEGKTIQTWN
DLTAIITENPDKPLDFEVERNGQVSSVEVTPKAIESNGEKIGQLGIQAPMKTGFFDKIIGGTQRAFSSSLEIFKALGSLF
TGFSLDKLGGPVMMFQLSSEAANQGIMTVIGLMAILSMNLGIVNLLPIPALDGGKLVLNIFEGVRGKPLSQEKEGILTLV
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=261842 CYK55_RS07990 WP_126134156.1 1634470..1635738(-) (eeP) [Enterococcus mundtii strain Pe161]
ATGAGAACAATTATCACGTTCATTATCGTTTTTGGCATCTTAGTGATCGTACATGAATTTGGCCACTTCTTCTTTGCGAA
ACGATCAGGAATCCTAGTTCGTGAGTTTGCGATTGGCATGGGACCTAAAATCTACGGTCATCAAGCAAAAGACGGCACGA
CTTATACATTGCGTTTGTTACCAATCGGTGGCTATGTGAGAATGGCTGGGAATGGGGACGACGAAACGGAAATGGCCCCA
GGAATGCCGTTATCACTCTTGATGGATTCAGATCATGTCGTAAAGAAAATCAATTTAAGCAAAAAAATCCAATTGACCAA
TGCGATCCCAATGGAATTGATCCGTTATGATCTTGATGAAGCACTCACGATCACAGGTTATGTGAATGGTGATGAAACGC
AAGAAGTAACGTATGCAGTGAATCATGATGCTTCGATCATCGAGGCGGATGGGACTGAATTGAGGATCGCACCGAGAGAT
GTACAGTTCCAATCAGCCAAATTATGGCAACGAATGTTGACTAACTTTGCGGGTCCAATGAATAATTTTATTCTAGCGAT
TCTATTATTCATCATATTAGCATTCATGCAAGGCGGGGTGACAGTCACAAATACCAACCAAATCGGTGTTGTTACGCCAG
ACGGAGCTGCGGCTGCAGCCGGACTGAAAGAAAATGATGAAATTCTTTCAGTAGAGGGAAAAACAATCCAAACATGGAAT
GATCTGACAGCGATCATTACTGAAAATCCAGATAAACCACTTGATTTTGAAGTTGAACGAAATGGACAGGTTTCTTCTGT
TGAAGTGACACCGAAAGCAATTGAGTCGAATGGTGAAAAAATTGGTCAACTTGGGATACAAGCGCCAATGAAAACTGGCT
TCTTCGATAAGATCATCGGTGGAACACAACGTGCATTTAGTAGCTCTTTGGAAATATTCAAAGCATTAGGTTCATTATTT
ACCGGCTTTAGCTTGGACAAATTAGGTGGACCGGTGATGATGTTCCAATTGTCTTCTGAGGCAGCGAATCAAGGAATCAT
GACAGTCATTGGTTTGATGGCAATCTTATCCATGAATTTAGGGATCGTCAATTTATTGCCAATCCCAGCATTAGATGGTG
GAAAACTAGTCTTGAATATTTTTGAAGGTGTCCGTGGTAAACCACTTAGTCAGGAAAAAGAAGGCATTTTGACGCTTGTT
GGTTTTGGCTTCCTGATGCTATTGATGGTATTAGTAACATGGAATGACATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(197-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.206

100

0.55
  eeP Streptococcus thermophilus LMG 18311

53.972

100

0.547

Multiple sequence alignment