Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   DR994_RS09850 Genome accession   NZ_CP030927
Coordinates   553927..554130 (-) Length   67 a.a.
NCBI ID   WP_224103626.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CS9     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 548927..559130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DR994_RS02890 (DR994_02970) - 549027..550121 (-) 1095 WP_173940406.1 sensor histidine kinase -
  DR994_RS02895 (DR994_02975) - 550114..550851 (-) 738 WP_173940407.1 ABC transporter permease -
  DR994_RS02900 (DR994_02980) - 550848..551729 (-) 882 WP_173940408.1 ABC transporter ATP-binding protein -
  DR994_RS02905 (DR994_02985) - 551722..551901 (-) 180 WP_014608476.1 hypothetical protein -
  DR994_RS02910 (DR994_02990) - 551912..552121 (-) 210 WP_011226217.1 hypothetical protein -
  DR994_RS02915 (DR994_02995) - 552273..553211 (-) 939 WP_173940409.1 bile acid:sodium symporter family protein -
  DR994_RS02920 (DR994_03000) - 553354..553803 (-) 450 WP_096811543.1 cytidine deaminase -
  DR994_RS09850 comA/nlmT 553927..554130 (-) 204 WP_224103626.1 ABC transporter ATP-binding protein Regulator
  DR994_RS09855 - 554609..555139 (+) 531 WP_224103625.1 hypothetical protein -
  DR994_RS02935 (DR994_03015) - 555143..555703 (+) 561 WP_173940410.1 hypothetical protein -
  DR994_RS02940 (DR994_03025) - 556338..556784 (-) 447 WP_173940411.1 GNAT family N-acetyltransferase -
  DR994_RS02945 (DR994_03030) - 556799..557527 (-) 729 Protein_540 helicase-related protein -
  DR994_RS02950 (DR994_03035) - 557622..558064 (-) 443 Protein_541 ASCH domain-containing protein -
  DR994_RS09860 - 558076..558321 (-) 246 WP_224103624.1 hypothetical protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 7756.99 Da        Isoelectric Point: 4.1469

>NTDB_id=261841 DR994_RS09850 WP_224103626.1 553927..554130(-) (comA/nlmT) [Streptococcus thermophilus strain CS9]
MARALLMKTDILFLDEFSSGIDLETLSKIENRLLQTSKLIIYITHVDTDRIIQQFDEIIDLNGFVDL

Nucleotide


Download         Length: 204 bp        

>NTDB_id=261841 DR994_RS09850 WP_224103626.1 553927..554130(-) (comA/nlmT) [Streptococcus thermophilus strain CS9]
TTGGCAAGAGCCTTATTGATGAAGACGGATATCTTATTTTTAGACGAATTTTCTTCTGGTATTGACCTTGAAACGTTATC
AAAAATAGAGAATCGACTTTTACAAACGAGTAAATTAATTATTTACATCACACATGTAGACACCGATAGAATTATCCAAC
AATTTGATGAAATAATAGATTTGAATGGGTTTGTAGACTTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

45

89.552

0.403
  comA Streptococcus gordonii str. Challis substr. CH1

32.911

100

0.388