Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CXZ13_RS08275 Genome accession   NZ_CP025412
Coordinates   1735583..1736860 (-) Length   425 a.a.
NCBI ID   WP_104795753.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain X7021     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1730583..1741860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXZ13_RS08270 (CXZ13_08295) - 1733834..1735543 (-) 1710 WP_053267830.1 proline--tRNA ligase -
  CXZ13_RS08275 (CXZ13_08300) eeP 1735583..1736860 (-) 1278 WP_104795753.1 RIP metalloprotease RseP Regulator
  CXZ13_RS08280 (CXZ13_08305) - 1736898..1737683 (-) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  CXZ13_RS08285 (CXZ13_08310) - 1737699..1738478 (-) 780 WP_003640735.1 isoprenyl transferase -
  CXZ13_RS08290 (CXZ13_08315) frr 1738598..1739161 (-) 564 WP_003640736.1 ribosome recycling factor -
  CXZ13_RS08295 (CXZ13_08320) pyrH 1739163..1739885 (-) 723 WP_003640737.1 UMP kinase -
  CXZ13_RS08300 (CXZ13_08325) tsf 1740085..1740963 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45769.27 Da        Isoelectric Point: 9.7123

>NTDB_id=261075 CXZ13_RS08275 WP_104795753.1 1735583..1736860(-) (eeP) [Lactiplantibacillus plantarum strain X7021]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTGVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=261075 CXZ13_RS08275 WP_104795753.1 1735583..1736860(-) (eeP) [Lactiplantibacillus plantarum strain X7021]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGGAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGTCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAACGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATCTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.598

100

0.489
  eeP Streptococcus thermophilus LMG 18311

48.598

100

0.489

Multiple sequence alignment