Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | HAC_RS07355 | Genome accession | NC_008229 |
| Coordinates | 1508579..1509154 (-) | Length | 191 a.a. |
| NCBI ID | WP_011578511.1 | Uniprot ID | Q17V97 |
| Organism | Helicobacter acinonychis str. Sheeba | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1503579..1514154
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAC_RS07340 (Hac_1730) | - | 1504339..1505187 (-) | 849 | WP_011578508.1 | biotin synthase | - |
| HAC_RS07345 (Hac_1731) | - | 1505314..1506510 (-) | 1197 | WP_011578509.1 | restriction endonuclease subunit S | - |
| HAC_RS07350 (Hac_1732) | - | 1506507..1508546 (-) | 2040 | WP_011578510.1 | HsdM family class I SAM-dependent methyltransferase | - |
| HAC_RS07355 (Hac_1733) | comFC | 1508579..1509154 (-) | 576 | WP_011578511.1 | ComF family protein | Machinery gene |
| HAC_RS07360 (Hac_1734) | tmk | 1509142..1509717 (-) | 576 | WP_011578512.1 | dTMP kinase | - |
| HAC_RS07365 (Hac_1735) | coaD | 1509719..1510192 (-) | 474 | WP_011578513.1 | pantetheine-phosphate adenylyltransferase | - |
| HAC_RS07370 (Hac_1736) | - | 1510192..1510755 (-) | 564 | WP_011578514.1 | UbiX family flavin prenyltransferase | - |
| HAC_RS07375 (Hac_1737) | flgA | 1510765..1511421 (-) | 657 | WP_011578515.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| HAC_RS07380 (Hac_1738) | - | 1511418..1513463 (-) | 2046 | WP_011578516.1 | ATP-dependent helicase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21252.86 Da Isoelectric Point: 9.4521
>NTDB_id=26078 HAC_RS07355 WP_011578511.1 1508579..1509154(-) (comFC) [Helicobacter acinonychis str. Sheeba]
MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRVLPLLSQKVGAKFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNLRATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLRLSFKPLCQNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRVLPLLSQKVGAKFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPAYGNLRATNSVSYAGKSLEFRANNPRNFTFKGDGFLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=26078 HAC_RS07355 WP_011578511.1 1508579..1509154(-) (comFC) [Helicobacter acinonychis str. Sheeba]
ATGCGTTGTTTAACTTGTTTAAGGCTCTCTTTCAAGCCCCTTTGCCAGAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAATTGATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCGTTTTGCCCTTGCTTTCTCAAAAAGTGGGCGCAAAGTTTGTGAAAATCTTACAAGAAAAAGGC
TTGAACGCCCCCCTTTATGGCATCGCTATTGATGATAAGATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCGCTTACGGGAATTTAAGGGCGACTAATTCTGTTTCGTATGCCGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCTAGGAATTTCACTTTCAAAGGCGATGGATTTTTAGATTATTTCTTGTTGGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATATCTTAAAACTCTCAATATTAAAGCGCATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTAAGGCTCTCTTTCAAGCCCCTTTGCCAGAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAATTGATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCGTTTTGCCCTTGCTTTCTCAAAAAGTGGGCGCAAAGTTTGTGAAAATCTTACAAGAAAAAGGC
TTGAACGCCCCCCTTTATGGCATCGCTATTGATGATAAGATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCGCTTACGGGAATTTAAGGGCGACTAATTCTGTTTCGTATGCCGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCTAGGAATTTCACTTTCAAAGGCGATGGATTTTTAGATTATTTCTTGTTGGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATATCTTAAAACTCTCAATATTAAAGCGCATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
92.67 |
100 |
0.927 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
37.5 |
100 |
0.377 |