Detailed information NTG0260575

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: DSB67_RS13775
• Genome accession: NZ_CP030788
• Coordinates: 2845767..2848589 (+)
• Length: 940 a.a.
• NCBI ID: WP_010648164.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain DS40M4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2840767..2853589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DSB67_RS13755 (DSB67_13760)	csrD	2840858..2842867 (-)	2010	WP_010648157.1	RNase E specificity factor CsrD	-
DSB67_RS13760 (DSB67_13765)	ssb	2843115..2843654 (-)	540	WP_010648159.1	single-stranded DNA-binding protein	Machinery gene
DSB67_RS13765 (DSB67_13770)	qstR	2843948..2844592 (+)	645	WP_005432827.1	LuxR C-terminal-related transcriptional regulator	Regulator
DSB67_RS13770 (DSB67_13775)	galU	2844756..2845628 (+)	873	WP_010648161.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
DSB67_RS13775 (DSB67_13780)	uvrA	2845767..2848589 (+)	2823	WP_010648164.1	excinuclease ABC subunit UvrA	Machinery gene
DSB67_RS13780 (DSB67_13785)	-	2848656..2850440 (+)	1785	WP_010648166.1	PglL family O-oligosaccharyltransferase	-
DSB67_RS13785 (DSB67_13790)	-	2850497..2851618 (-)	1122	WP_010648167.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
DSB67_RS13795 (DSB67_13800)	lysC	2852144..2853496 (+)	1353	WP_010648169.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103991.30 Da
• Isoelectric Point: 6.3141

>NTDB_id=260575 DSB67_RS13775 WP_010648164.1 2845767..2848589(+) (uvrA) [Vibrio campbellii strain DS40M4]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYDFDLHAPFNSLPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIPVPKERTPRDPKKTVELVGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPSPYKAIKGLEYFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDR
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIDGSHTARFLKPMLN

Nucleotide

• Length: 2823 bp

>NTDB_id=260575 DSB67_RS13775 WP_010648164.1 2845767..2848589(+) (uvrA) [Vibrio campbellii strain DS40M4]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAATTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGATACTTTGTACGCTGAAGGACAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGTTCTACCGTCGGTACCATTACCGAGGTATACGATTA
CCTGCGTCTACTTTACGCTCGCGTTGGTGAGCCTCGTTGTCCGACGCACCATACACCTCTAGCCGCTCAAACCATCAGCC
AGATGGTCGATAAAGTCTTAGAGTTGCCAGAAGGCAGCAAAATGATGCTACTTGCTCCTATCGTGAAAGAGCGTAAAGGT
GAGCACGTTAAGACTTTAGAGAACCTTGCTGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGTTAGAACTGCACAAGAAACACACTATTGAAGTGGTTGTGGACCGCTTTAAAGTTCGCCCAGATTTGC
AGCAACGTTTGGCTGAATCATTCGAAACCACACTAGAGCTATCTGGCGGTATTGCTGTTGTTGCTCCAATGGACGGCGAC
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGTCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCAGGTGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGACTTCGATCTTCACGCACCATTTAACTCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAACACACTTGAACGCCGTTACCGCGATACTGAATCTAACTCGGTACGTGAAGAGCTTGCGAAATACATC
TCTACTAAGTCTTGCTCAAGCTGTGGTGGTACTCGTCTACGCCTTGAAGCTCGTAACGTCTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAATTCTTCCACACTTTGAAGCTCGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTGCAATTCTTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGCAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCAAGCCAAATTGGTGCGGGTCTAGTAGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACCTAA
GAGATTTAGGTAACACGGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGTGCCGGTGTACACGGTGGTAACGTGGTCGCCGAAGGTACGATGGACGAGATCATTGCCAATCCGAACTCATTGAC
TGGTCAGTACCTCAGTGGCGCGAAAGAGATTCCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAT
TAGTTGGCGCGACAGGTAACAACTTAAAGAATGTCGACCTTTCCGTTCCTGTTGGCTTGTTCAGTTGTATTACCGGTGTA
TCCGGCTCAGGTAAATCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCAACCTTCACCATATAAAGCGATCAAAGGTTTAGAGTACTTCGATAAAGTTATCGACATTGACCAAAGCCCTATCGGTC
GTACGCCACGCTCAAACCCAGCCACTTACACGGGAATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGCGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGAGGTCGCTGTGAGGCGTGTCAGGGTGATGGTGT
AATTAAGGTAGAAATGCACTTCTTACCTGACGTTTACGTTCCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTACAAAGGCAAGACCATTGATGAAGTATTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCAGTACCTGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTAGGTTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGTGAAGCTCAGCGTGTGAAACTGGCTCGAGAGCTGTCTAAGCGTGATACTGGTAAAACCTTATACA
TTTTGGATGAGCCGACAACCGGTCTGCACTTCCACGATATCCAGCAGTTATTAACTGTACTGCACCGTCTGCGAGACCGC
GGAAATACCGTTGTCGTCATTGAACATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGTCCCGAAGG
CGGACAAGGCGGCGGTGAGATCATCGCACAAGGAACACCTGAAGATGTGTCTCAGATCGACGGTTCACACACAGCTCGCT
TCCTTAAGCCTATGTTGAACTAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.264	100	0.574
uvrA	Streptococcus pneumoniae TIGR4	57.264	100	0.574
uvrA	Streptococcus pneumoniae D39	57.264	100	0.574