Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   C9F11_RS23540 Genome accession   NZ_CP030771
Coordinates   5512743..5513867 (-) Length   374 a.a.
NCBI ID   WP_138961136.1    Uniprot ID   -
Organism   Streptomyces sp. YIM 121038     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5507743..5518867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9F11_RS23520 (C9F11_23455) - 5508228..5509799 (+) 1572 WP_249401853.1 histidine kinase -
  C9F11_RS23525 (C9F11_23460) - 5509796..5510482 (+) 687 WP_138961134.1 response regulator transcription factor -
  C9F11_RS23530 - 5510977..5511597 (-) 621 Protein_4604 phosphatase PAP2 family protein -
  C9F11_RS23535 (C9F11_23470) - 5511827..5512660 (+) 834 WP_138961135.1 hypothetical protein -
  C9F11_RS23540 (C9F11_23475) disA 5512743..5513867 (-) 1125 WP_138961136.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C9F11_RS23545 (C9F11_23480) radA/sms 5513958..5515367 (-) 1410 WP_138961137.1 DNA repair protein RadA Machinery gene
  C9F11_RS23555 (C9F11_23485) - 5515644..5517353 (+) 1710 WP_249401854.1 sigma-70 family RNA polymerase sigma factor -
  C9F11_RS23560 (C9F11_23490) - 5517363..5518307 (-) 945 WP_138966901.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40038.79 Da        Isoelectric Point: 4.9235

>NTDB_id=260476 C9F11_RS23540 WP_138961136.1 5512743..5513867(-) (disA) [Streptomyces sp. YIM 121038]
MAANDRAAVPGKPGGGSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLVALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDSLTHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=260476 C9F11_RS23540 WP_138961136.1 5512743..5513867(-) (disA) [Streptomyces sp. YIM 121038]
GTGGCAGCCAACGACCGGGCAGCGGTTCCCGGGAAGCCCGGTGGCGGCTCCGGTGCCGACGGGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCGCCGGGCACGGCCCTGCGGGACGGCCTGGAGCGCATCCTGCGGGGCAACACGGGCGGGCTCATCGTCC
TCGGCTCCGACAAGACAGTCGAGTCGATGTGCACGGGCGGATTCGTCCTGGACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGCGTCCAGCTGGTGCC
GGACCCGACGATCCCCACGGAGGAGACCGGCACGCGGCACCGCACGGCGGACCGCGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTGTCCGTGTCCCAGTCGATGCGCCTGGTCGCGCTGTACGTGGACGGACAGCGCCGGGTCCTTGAGGACTCGGCGGCG
ATCCTGTCACGTGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACCGTGCGGGACGTCACCGCCGTCGCGCAGCGCCTCGAAATGGTGCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTCCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTCGTCGTCCGGGACTACGTCCCCGAGCCCACGGCCAAGCGCTCGCGCACCGTCGACGA
GGCACTGGCCGAGCTGGACTCCCTGACCCACGCCGAGCTCCTGGAACTGTCCACCGTGGCCCGCGCGTTGGGCTACACGG
GCTCGCCCGAGACCCTCGACTCCGCCGTCTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTGCCCCGGCTGCCCGGCGCC
ATCATCGAGCGCCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCCGCGAGCGTCGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTGCGCGAGGGGCTCTCACGGCTCGCGGAGTCGTCGATCCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438