Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | SPD_RS07890 | Genome accession | NC_008533 |
| Coordinates | 1501141..1501737 (-) | Length | 198 a.a. |
| NCBI ID | WP_000966743.1 | Uniprot ID | P0CB76 |
| Organism | Streptococcus pneumoniae D39 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1496141..1506737
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPD_RS07870 (SPD_1481) | - | 1497072..1497776 (-) | 705 | WP_001055251.1 | TIGR02206 family membrane protein | - |
| SPD_RS07875 (SPD_1482) | - | 1497867..1498478 (-) | 612 | WP_000857991.1 | NUDIX hydrolase N-terminal domain-containing protein | - |
| SPD_RS07880 (SPD_1483) | - | 1498465..1499838 (-) | 1374 | WP_000778688.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| SPD_RS07885 (SPD_1484) | - | 1499922..1500965 (-) | 1044 | WP_000814630.1 | D-alanine--D-alanine ligase | - |
| SPD_RS07890 (SPD_1485) | recR | 1501141..1501737 (-) | 597 | WP_000966743.1 | recombination mediator RecR | Machinery gene |
| SPD_RS07895 (SPD_1486) | pbp2b | 1501748..1503805 (-) | 2058 | WP_001829432.1 | penicillin-binding protein 2B | - |
| SPD_RS07900 (SPD_1487) | - | 1504005..1504856 (+) | 852 | WP_000360334.1 | MurR/RpiR family transcriptional regulator | - |
| SPD_RS07905 (SPD_1488) | - | 1504872..1505756 (-) | 885 | WP_000222983.1 | ROK family protein | - |
| SPD_RS07910 (SPD_1489) | - | 1505774..1506691 (-) | 918 | Protein_1495 | dihydrodipicolinate synthase family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21688.86 Da Isoelectric Point: 4.5622
>NTDB_id=26023 SPD_RS07890 WP_000966743.1 1501141..1501737(-) (recR) [Streptococcus pneumoniae D39]
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=26023 SPD_RS07890 WP_000966743.1 1501141..1501737(-) (recR) [Streptococcus pneumoniae D39]
ATGCTTTATCCAACACCTATTGCCAAGTTGATTGACAGTTATTCTAAGTTACCAGGTATCGGGATTAAGACGGCTACGCG
TCTGGCCTTTTATACGATTGGGATGTCTGCTGATGATGTCAATGAATTTGCAAAAAATCTCCTTTCTGCTAAGAGAGAAT
TGACATATTGTTCTATTTGTGGACGTTTGACAGACGACGATCCTTGTTCTATCTGTACTGATCCGACTCGTGACCAGACA
ACAATTTTAGTTCTTGAGGATAGTAGAGATGTGGCAGCCATGGAAAATATCCAAGAATACCATGGACTCTATCATGTCCT
TCATGGCCTCATTTCTCCTATGAATGGTATCAGTCCGGACGATATCAATCTCAAGAGCCTTATGACTCGTCTTATGGATA
GTGAGGTTTCAGAAGTGATTGTGGCGACTAATGCTACAGCGGATGGTGAAGCGACTTCCATGTATCTTTCACGTTTGCTC
AAGCCGGCTGGTATCAAGGTTACGCGTCTAGCACGAGGTCTCGCTGTGGGAGCGGACATTGAGTATGCGGACGAAGTGAC
ACTCTTACGAGCCATTGAAAATCGGACAGAGTTGTAA
ATGCTTTATCCAACACCTATTGCCAAGTTGATTGACAGTTATTCTAAGTTACCAGGTATCGGGATTAAGACGGCTACGCG
TCTGGCCTTTTATACGATTGGGATGTCTGCTGATGATGTCAATGAATTTGCAAAAAATCTCCTTTCTGCTAAGAGAGAAT
TGACATATTGTTCTATTTGTGGACGTTTGACAGACGACGATCCTTGTTCTATCTGTACTGATCCGACTCGTGACCAGACA
ACAATTTTAGTTCTTGAGGATAGTAGAGATGTGGCAGCCATGGAAAATATCCAAGAATACCATGGACTCTATCATGTCCT
TCATGGCCTCATTTCTCCTATGAATGGTATCAGTCCGGACGATATCAATCTCAAGAGCCTTATGACTCGTCTTATGGATA
GTGAGGTTTCAGAAGTGATTGTGGCGACTAATGCTACAGCGGATGGTGAAGCGACTTCCATGTATCTTTCACGTTTGCTC
AAGCCGGCTGGTATCAAGGTTACGCGTCTAGCACGAGGTCTCGCTGTGGGAGCGGACATTGAGTATGCGGACGAAGTGAC
ACTCTTACGAGCCATTGAAAATCGGACAGAGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |