Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CXM95_RS05895 Genome accession   NZ_CP025223
Coordinates   1217588..1218856 (+) Length   422 a.a.
NCBI ID   WP_086299627.1    Uniprot ID   -
Organism   Enterococcus sp. CR-Ec1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1212588..1223856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXM95_RS05870 (CXM95_05870) tsf 1213332..1214213 (+) 882 WP_005229432.1 translation elongation factor Ts -
  CXM95_RS05875 (CXM95_05875) pyrH 1214361..1215083 (+) 723 WP_005229433.1 UMP kinase -
  CXM95_RS05880 (CXM95_05880) frr 1215085..1215642 (+) 558 WP_005229434.1 ribosome recycling factor -
  CXM95_RS05885 (CXM95_05885) - 1215834..1216634 (+) 801 WP_086299628.1 isoprenyl transferase -
  CXM95_RS05890 (CXM95_05890) - 1216631..1217437 (+) 807 WP_101698914.1 phosphatidate cytidylyltransferase -
  CXM95_RS05895 (CXM95_05895) eeP 1217588..1218856 (+) 1269 WP_086299627.1 RIP metalloprotease RseP Regulator
  CXM95_RS05900 (CXM95_05900) - 1218926..1220635 (+) 1710 WP_008381112.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45401.67 Da        Isoelectric Point: 4.5434

>NTDB_id=259108 CXM95_RS05895 WP_086299627.1 1217588..1218856(+) (eeP) [Enterococcus sp. CR-Ec1]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVTKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAVTYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATVVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPATKITLEVKRGAETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGVRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=259108 CXM95_RS05895 WP_086299627.1 1217588..1218856(+) (eeP) [Enterococcus sp. CR-Ec1]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTGGTGGTAGTGATTCACGAATTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCAGGCTGGGGCGAAGATGAGACCGAATTAACGCCT
GGCATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTCACCAAAATCAATACAAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCCATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACTGGCTTCATCAACGGCAATGAACAAG
AAGCGGTTACGTACGCTGTGGATCATGACGCAACGATCATTCATGAAGATGGCGTTGAAGTTCGGATCGCACCAAAAGAC
GTTCAATTCCAGTCTGCAAAGCTGTGGCAACGAATGCTGACGAATTTTGCAGGACCGATGAATAACTTTATTTTATCCTT
GGTTTTATTCACTGGGTTGGTGTTTGCGCAAGGTGGTGTCGCGAATCAAGATGCAACCGTCGTGACAGGAATCGAAGCAG
GAACCCCGGCAGCTGAAGCCGGGCTGCAAAATGGCGACGAAATCCTAGCAGTTGAAGGCGTCGATGTTTCCAACTGGTCA
GAATTGACGACAGAGATCCAAAAGTACCCAGCTACTAAGATTACTCTAGAAGTCAAACGAGGAGCGGAAACACTTGATTT
AACAGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATCGGTTTCTTAGGGATCACGGCTTCGTTAAAAACTGGGA
TCGGAGACATCTTACTGGGTGGCTTACAAACGACCATTGACAATTCGCTGGTTATTTTTAGAGCAGTCGGCAACTTGATC
GCCCAACCAGATATCAATAAATTGGGCGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCCGCATCGCAAGGTGTCAC
AACGGTGATCGCCATGATGGCGATGATTTCCATCAATTTGGGGATCTTTAATTTATTGCCGATTCCTGGATTAGATGGTG
GGAAACTGGTTTTAAATATTTTAGAAGGTGTGCGAGGCAAGCCAATCAGTCAAGAAAAAGAAGGCATCATTACCCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-408)

PDZ domain (PDZ)

(201-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

51.748

100

0.526
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519

Multiple sequence alignment