Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CXB48_RS20270 Genome accession   NZ_CP025149
Coordinates   4244858..4245265 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain SGAir0442     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4239858..4250265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CXB48_RS20250 (CXB48_20190) - 4240816..4241682 (-) 867 WP_049325531.1 CheR family methyltransferase -
  CXB48_RS20255 (CXB48_20195) - 4241743..4243791 (-) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  CXB48_RS20260 (CXB48_20200) - 4243870..4244406 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  CXB48_RS20265 (CXB48_20205) pilH 4244448..4244813 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  CXB48_RS20270 (CXB48_20210) pilG 4244858..4245265 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  CXB48_RS20275 (CXB48_20215) gshB 4245502..4246452 (+) 951 WP_013984318.1 glutathione synthase -
  CXB48_RS20280 (CXB48_20220) - 4246540..4247433 (+) 894 WP_019405529.1 energy transducer TonB -
  CXB48_RS20285 (CXB48_20225) - 4247499..4248068 (+) 570 WP_011914961.1 YqgE/AlgH family protein -
  CXB48_RS20290 (CXB48_20230) ruvX 4248065..4248493 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  CXB48_RS20295 (CXB48_20235) pyrR 4248511..4249026 (+) 516 WP_095460260.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CXB48_RS20300 (CXB48_20240) - 4249079..4250095 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=258688 CXB48_RS20270 WP_003282729.1 4244858..4245265(-) (pilG) [Stutzerimonas stutzeri strain SGAir0442]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=258688 CXB48_RS20270 WP_003282729.1 4244858..4245265(-) (pilG) [Stutzerimonas stutzeri strain SGAir0442]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment