Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | PA14_RS18135 | Genome accession | NC_008463 |
| Coordinates | 3970442..3971038 (-) | Length | 198 a.a. |
| NCBI ID | WP_003111077.1 | Uniprot ID | Q02K17 |
| Organism | Pseudomonas aeruginosa UCBPP-PA14 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3965442..3976038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA14_RS31555 | - | 3965789..3965956 (-) | 168 | Protein_3611 | TetR family transcriptional regulator | - |
| PA14_RS18115 (PA14_44560) | - | 3966078..3967661 (+) | 1584 | WP_003121915.1 | flavin-containing monooxygenase | - |
| PA14_RS18120 (PA14_44570) | - | 3967658..3968545 (+) | 888 | WP_003087246.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| PA14_RS18125 (PA14_44580) | - | 3968619..3969158 (+) | 540 | WP_003111079.1 | CbrC family protein | - |
| PA14_RS18130 (PA14_44590) | - | 3969171..3970319 (-) | 1149 | WP_003111078.1 | acyl-CoA dehydrogenase family protein | - |
| PA14_RS18135 (PA14_44610) | recR | 3970442..3971038 (-) | 597 | WP_003111077.1 | recombination mediator RecR | Machinery gene |
| PA14_RS18140 (PA14_44620) | - | 3971117..3971443 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| PA14_RS18145 (PA14_44630) | dnaX | 3971489..3973594 (-) | 2106 | WP_011666715.1 | DNA polymerase III subunit gamma/tau | - |
| PA14_RS18150 (PA14_44640) | - | 3973631..3974497 (+) | 867 | WP_003140216.1 | substrate-binding periplasmic protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21201.48 Da Isoelectric Point: 6.3332
>NTDB_id=25858 PA14_RS18135 WP_003111077.1 3970442..3971038(-) (recR) [Pseudomonas aeruginosa UCBPP-PA14]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=25858 PA14_RS18135 WP_003111077.1 3970442..3971038(-) (recR) [Pseudomonas aeruginosa UCBPP-PA14]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |