Detailed information NTG0258554

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: DOU34_RS07975
• Genome accession: NZ_CP030097
• Coordinates: 1618227..1620230 (+)
• Length: 667 a.a.
• NCBI ID: WP_061046755.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SH-B74
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1613227..1625230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOU34_RS20895	-	1613640..1613789 (+)	150	WP_007410334.1	hypothetical protein	-
DOU34_RS07940	-	1613776..1614606 (+)	831	WP_007410333.1	prohibitin family protein	-
DOU34_RS07945	-	1614634..1615083 (-)	450	WP_003154009.1	YndM family protein	-
DOU34_RS07950	-	1615237..1615665 (+)	429	WP_032871574.1	hypothetical protein	-
DOU34_RS07955	dinR/lexA	1616004..1616624 (-)	621	WP_007611720.1	transcriptional repressor LexA	Regulator
DOU34_RS07960	yneA	1616781..1617092 (+)	312	WP_003154001.1	cell division suppressor protein YneA	-
DOU34_RS07965	-	1617108..1617758 (+)	651	WP_061046756.1	recombinase family protein	-
DOU34_RS07970	-	1617827..1618060 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
DOU34_RS07975	recP/tkt	1618227..1620230 (+)	2004	WP_061046755.1	transketolase	Machinery gene
DOU34_RS07980	sirA	1620382..1620828 (+)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
DOU34_RS07985	-	1620914..1621132 (+)	219	WP_003153994.1	YneF family protein	-
DOU34_RS07990	-	1621206..1621379 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
DOU34_RS07995	-	1621581..1622288 (+)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
DOU34_RS08000	-	1622373..1622735 (+)	363	WP_061046754.1	response regulator	-
DOU34_RS08005	-	1622815..1623306 (+)	492	WP_007611735.1	CcdC protein domain-containing protein	-
DOU34_RS08010	-	1623334..1623762 (-)	429	WP_007410325.1	DUF2621 domain-containing protein	-
DOU34_RS08015	-	1623997..1624368 (-)	372	WP_015239929.1	Hsp20/alpha crystallin family protein	-
DOU34_RS08020	-	1624462..1624608 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
DOU34_RS08025	sspO	1624638..1624784 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72570.79 Da
• Isoelectric Point: 4.9505

>NTDB_id=258554 DOU34_RS07975 WP_061046755.1 1618227..1620230(+) (recP/tkt) [Bacillus amyloliquefaciens strain SH-B74]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMKVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGQEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTESPAALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=258554 DOU34_RS07975 WP_061046755.1 1618227..1620230(+) (recP/tkt) [Bacillus amyloliquefaciens strain SH-B74]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATATACGCTGTGGACGAAATTTATGAAGGTAAACCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCACAC
AGCCGGAGTAGACGCTACGACCGGGCCGCTTGGGCAGGGTATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGATGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACA
TTGATCGAAGTGAAAACCACCATCGGTTTCGGTTCTCCAAACCGCGCGGGCACATCCGGCGTCCATGGCGCTCCGTTAGG
ACAAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCAGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGAATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTGGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCGTCATTGATGGGTCTTC
CCGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAGGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATATCGTTTCAAAAGCCCAAACGGAATCACCGGCCGCTCTTCTTTTAGCGACAGGT
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCCGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGTAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGTTGACCGCGTGAAAAAACTTTTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.061	98.951	0.555