Detailed information NTG0258537

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: DOU34_RS06535
• Genome accession: NZ_CP030097
• Coordinates: 1272865..1273887 (+)
• Length: 340 a.a.
• NCBI ID: WP_007409697.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SH-B74
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1267865..1278887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOU34_RS06495	-	1268228..1268467 (+)	240	WP_039063037.1	YlbE-like family protein	-
DOU34_RS06500	ylbF	1268538..1268987 (+)	450	WP_003154472.1	YlbF family regulator	Regulator
DOU34_RS06505	-	1269046..1269318 (+)	273	WP_003154470.1	YlbG family protein	-
DOU34_RS06510	-	1269409..1269618 (+)	210	WP_007409692.1	hypothetical protein	-
DOU34_RS06515	rsmD	1269618..1270172 (+)	555	WP_007409693.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DOU34_RS06520	coaD	1270177..1270659 (+)	483	WP_007409694.1	pantetheine-phosphate adenylyltransferase	-
DOU34_RS06525	ylbJ	1270678..1271904 (-)	1227	WP_039063039.1	sporulation integral membrane protein YlbJ	-
DOU34_RS06530	-	1272080..1272859 (+)	780	WP_014304961.1	patatin family protein	-
DOU34_RS06535	sepM	1272865..1273887 (+)	1023	WP_007409697.1	SepM family pheromone-processing serine protease	Regulator
DOU34_RS06540	-	1273906..1275153 (-)	1248	WP_039063040.1	nucleotidyltransferase	-
DOU34_RS06545	-	1275362..1275880 (+)	519	WP_007409699.1	DUF177 domain-containing protein	-
DOU34_RS06550	rpmF	1275902..1276081 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
DOU34_RS06555	gerR	1276239..1276814 (+)	576	WP_039063041.1	sporulation-specific transcriptional regulator GerR	-
DOU34_RS06560	-	1276855..1277337 (-)	483	WP_007409700.1	N-acetyltransferase	-
DOU34_RS06565	-	1277500..1278381 (+)	882	WP_039063043.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37448.99 Da
• Isoelectric Point: 7.3837

>NTDB_id=258537 DOU34_RS06535 WP_007409697.1 1272865..1273887(+) (sepM) [Bacillus amyloliquefaciens strain SH-B74]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYEEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST

Nucleotide

• Length: 1023 bp

>NTDB_id=258537 DOU34_RS06535 WP_007409697.1 1272865..1273887(+) (sepM) [Bacillus amyloliquefaciens strain SH-B74]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGAAGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAAATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (127-193)

• Peptidase family M50 (Peptidase_M50) (99-218)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (230-330)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	38.953	100	0.394