Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BVQ_RS01970 Genome accession   NZ_CP025079
Coordinates   425672..426625 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain QST713     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 420672..431625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVQ_RS01945 (BVQ_01945) - 420718..422151 (+) 1434 WP_162782989.1 sensor histidine kinase -
  BVQ_RS01950 (BVQ_01950) rapC 422304..423452 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  BVQ_RS01955 (BVQ_01955) phrC 423436..423555 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  BVQ_RS01960 (BVQ_01960) - 423704..423814 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  BVQ_RS01965 (BVQ_01965) - 423894..425258 (-) 1365 WP_033575080.1 aspartate kinase -
  BVQ_RS01970 (BVQ_01970) ceuB 425672..426625 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  BVQ_RS01975 (BVQ_01975) - 426615..427562 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  BVQ_RS01980 (BVQ_01980) - 427556..428314 (+) 759 WP_053573731.1 ABC transporter ATP-binding protein -
  BVQ_RS01985 (BVQ_01985) - 428336..429280 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  BVQ_RS01990 (BVQ_01990) - 429322..430746 (-) 1425 WP_039252789.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=258177 BVQ_RS01970 WP_015239156.1 425672..426625(+) (ceuB) [Bacillus velezensis strain QST713]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=258177 BVQ_RS01970 WP_015239156.1 425672..426625(+) (ceuB) [Bacillus velezensis strain QST713]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment