Detailed information NTG0258175

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BVQ_RS01950
• Genome accession: NZ_CP025079
• Coordinates: 422304..423452 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain QST713
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 417304..428452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVQ_RS01930 (BVQ_01930)	-	417701..418384 (-)	684	WP_053573733.1	ABC transporter ATP-binding protein	-
BVQ_RS01935 (BVQ_01935)	-	418399..419835 (-)	1437	WP_053573732.1	ABC transporter permease	-
BVQ_RS01940 (BVQ_01940)	-	420048..420731 (+)	684	WP_007410267.1	response regulator transcription factor	-
BVQ_RS01945 (BVQ_01945)	-	420718..422151 (+)	1434	WP_162782989.1	sensor histidine kinase	-
BVQ_RS01950 (BVQ_01950)	rapC	422304..423452 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
BVQ_RS01955 (BVQ_01955)	phrC	423436..423555 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BVQ_RS01960 (BVQ_01960)	-	423704..423814 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
BVQ_RS01965 (BVQ_01965)	-	423894..425258 (-)	1365	WP_033575080.1	aspartate kinase	-
BVQ_RS01970 (BVQ_01970)	ceuB	425672..426625 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
BVQ_RS01975 (BVQ_01975)	-	426615..427562 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
BVQ_RS01980 (BVQ_01980)	-	427556..428314 (+)	759	WP_053573731.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=258175 BVQ_RS01950 WP_007410270.1 422304..423452(+) (rapC) [Bacillus velezensis strain QST713]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=258175 BVQ_RS01950 WP_007410270.1 422304..423452(+) (rapC) [Bacillus velezensis strain QST713]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAGACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568