Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CWI64_RS09635 Genome accession   NZ_CP025076
Coordinates   1791485..1792216 (+) Length   243 a.a.
NCBI ID   WP_000889919.1    Uniprot ID   A0A062WNF5
Organism   Streptococcus pneumoniae strain BHN97x     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1786485..1797216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI64_RS09615 (CWI64_09615) - 1788093..1788449 (+) 357 WP_000114421.1 hypothetical protein -
  CWI64_RS09620 (CWI64_09620) dnaJ 1788851..1789987 (+) 1137 WP_001066301.1 molecular chaperone DnaJ -
  CWI64_RS11715 - 1790309..1790548 (-) 240 WP_001812223.1 hypothetical protein -
  CWI64_RS09625 (CWI64_09625) - 1790710..1790997 (-) 288 WP_000777760.1 hypothetical protein -
  CWI64_RS09630 (CWI64_09630) - 1791007..1791417 (-) 411 WP_001278301.1 HIT family protein -
  CWI64_RS09635 (CWI64_09635) pptA 1791485..1792216 (+) 732 WP_000889919.1 ABC transporter ATP-binding protein Regulator
  CWI64_RS09640 (CWI64_09640) - 1792213..1793262 (+) 1050 WP_000653766.1 ABC transporter permease -
  CWI64_RS09650 (CWI64_09650) - 1793430..1793759 (-) 330 WP_000132572.1 hypothetical protein -
  CWI64_RS09655 (CWI64_09655) - 1794035..1794373 (+) 339 WP_000876675.1 LytTR family DNA-binding domain-containing protein -
  CWI64_RS09660 (CWI64_09660) comE/blpR 1794378..1795115 (+) 738 WP_001219120.1 LytTR family DNA-binding domain-containing protein Regulator
  CWI64_RS09665 (CWI64_09665) - 1795129..1796469 (+) 1341 WP_001017644.1 sensor histidine kinase -
  CWI64_RS09670 (CWI64_09670) blpC 1796511..1796666 (-) 156 WP_000358817.1 quorum-sensing system pheromone BlpC -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27012.49 Da        Isoelectric Point: 4.7737

>NTDB_id=258120 CWI64_RS09635 WP_000889919.1 1791485..1792216(+) (pptA) [Streptococcus pneumoniae strain BHN97x]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=258120 CWI64_RS09635 WP_000889919.1 1791485..1792216(+) (pptA) [Streptococcus pneumoniae strain BHN97x]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAGATGTTCCGTCTGGACCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGCCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACAAAAGAG
GAGGACCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WNF5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment