Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CWI35_RS16250 | Genome accession | NZ_CP025074 |
| Coordinates | 3127402..3128475 (+) | Length | 357 a.a. |
| NCBI ID | WP_021322348.1 | Uniprot ID | - |
| Organism | [Bacillus] caldolyticus strain NEB414 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3122402..3133475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWI35_RS16225 (CWI35_16195) | - | 3123593..3123769 (-) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
| CWI35_RS16230 (CWI35_16200) | - | 3123939..3124571 (+) | 633 | WP_011231920.1 | MBL fold metallo-hydrolase | - |
| CWI35_RS16235 (CWI35_16205) | - | 3124893..3126026 (+) | 1134 | WP_119878023.1 | SAM-dependent methyltransferase | - |
| CWI35_RS16240 (CWI35_16210) | - | 3126110..3126352 (-) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| CWI35_RS16245 (CWI35_16215) | - | 3126511..3127209 (-) | 699 | WP_011231918.1 | helix-turn-helix domain-containing protein | - |
| CWI35_RS16250 (CWI35_16220) | comGA | 3127402..3128475 (+) | 1074 | WP_021322348.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CWI35_RS16255 (CWI35_16225) | comGB | 3128472..3129500 (+) | 1029 | WP_047758066.1 | competence type IV pilus assembly protein ComGB | - |
| CWI35_RS16260 (CWI35_16230) | comGC | 3129703..3129999 (+) | 297 | WP_011231915.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CWI35_RS16265 (CWI35_16235) | comGD | 3129989..3130426 (+) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| CWI35_RS16270 (CWI35_16240) | - | 3130410..3130736 (+) | 327 | WP_047758065.1 | type II secretion system protein | - |
| CWI35_RS16275 (CWI35_16245) | comGF | 3130715..3131161 (+) | 447 | WP_047758064.1 | competence type IV pilus minor pilin ComGF | - |
| CWI35_RS16280 (CWI35_16250) | comGG | 3131236..3131625 (+) | 390 | WP_047758063.1 | competence type IV pilus minor pilin ComGG | - |
| CWI35_RS16285 (CWI35_16255) | - | 3131672..3131851 (+) | 180 | WP_011231910.1 | YqzE family protein | - |
| CWI35_RS16290 (CWI35_16260) | - | 3131954..3132748 (-) | 795 | WP_119877923.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39535.99 Da Isoelectric Point: 8.7901
>NTDB_id=258049 CWI35_RS16250 WP_021322348.1 3127402..3128475(+) (comGA) [[Bacillus] caldolyticus strain NEB414]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
Nucleotide
Download Length: 1074 bp
>NTDB_id=258049 CWI35_RS16250 WP_021322348.1 3127402..3128475(+) (comGA) [[Bacillus] caldolyticus strain NEB414]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.581 |
96.359 |
0.487 |