Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CWI35_RS06110 Genome accession   NZ_CP025074
Coordinates   1164096..1164776 (-) Length   226 a.a.
NCBI ID   WP_011230320.1    Uniprot ID   -
Organism   [Bacillus] caldolyticus strain NEB414     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1159096..1169776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI35_RS06095 (CWI35_06085) pepF 1159151..1160974 (-) 1824 WP_013523174.1 oligoendopeptidase F Regulator
  CWI35_RS06100 (CWI35_06090) - 1160974..1162302 (-) 1329 WP_011230322.1 competence protein CoiA family protein -
  CWI35_RS06105 (CWI35_06095) cls 1162491..1163999 (-) 1509 WP_011230321.1 cardiolipin synthase -
  CWI35_RS06110 (CWI35_06100) mecA 1164096..1164776 (-) 681 WP_011230320.1 adaptor protein MecA Regulator
  CWI35_RS06115 (CWI35_06105) - 1164987..1165646 (+) 660 WP_014195176.1 TerC family protein -
  CWI35_RS06120 (CWI35_06110) spxA 1165697..1166095 (-) 399 WP_011230318.1 transcriptional regulator SpxA -
  CWI35_RS06125 (CWI35_06115) - 1166398..1166580 (+) 183 WP_011230317.1 hypothetical protein -
  CWI35_RS06130 (CWI35_06120) - 1166669..1167604 (-) 936 WP_068894952.1 ATP-binding cassette domain-containing protein -
  CWI35_RS06135 (CWI35_06125) - 1167597..1168658 (-) 1062 WP_014195173.1 ABC transporter ATP-binding protein -
  CWI35_RS06140 (CWI35_06130) opp3C 1168680..1169702 (-) 1023 WP_013146073.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26800.80 Da        Isoelectric Point: 4.1348

>NTDB_id=258014 CWI35_RS06110 WP_011230320.1 1164096..1164776(-) (mecA) [[Bacillus] caldolyticus strain NEB414]
MEIERINEHTVKFYISYVDIEERGFDREEIWYNRERSEELFWEMMDEVHGESDFSLDGPLWIQVQALEKGLEVVVTKAQL
SKDGSKLELPLPEEKWREFSLSAGEKVESLFGHHFHFGQNGDAEEREEQDVLQFILSFKDIEDVISLAHRADFSRLSNRL
FQFEGRYYLFVEFDERYTEQEVDNMLSLLLEYGSDSQLTIYRLEEYGTEIMGDNALETIKTYFPAL

Nucleotide


Download         Length: 681 bp        

>NTDB_id=258014 CWI35_RS06110 WP_011230320.1 1164096..1164776(-) (mecA) [[Bacillus] caldolyticus strain NEB414]
ATGGAAATCGAACGCATCAATGAACATACGGTGAAGTTCTACATTTCCTATGTTGATATAGAGGAGCGCGGCTTTGACCG
CGAGGAAATTTGGTACAATCGGGAACGAAGCGAAGAATTATTTTGGGAAATGATGGATGAAGTTCACGGGGAAAGCGATT
TTTCGCTCGATGGCCCGCTTTGGATCCAAGTGCAGGCGCTCGAAAAAGGGCTTGAAGTCGTCGTGACGAAAGCGCAGTTG
TCCAAAGACGGAAGCAAGCTCGAGCTGCCGCTTCCAGAAGAGAAATGGCGCGAGTTTTCGCTGTCAGCTGGTGAAAAGGT
GGAATCGCTGTTCGGCCACCATTTCCACTTTGGTCAAAACGGGGACGCCGAGGAGAGAGAAGAGCAAGATGTCCTTCAAT
TCATCCTTTCGTTCAAGGATATCGAGGATGTCATTTCCTTGGCCCATCGCGCTGACTTCTCTCGGTTGTCGAATCGCCTG
TTCCAATTTGAAGGCCGCTATTACTTGTTCGTGGAGTTTGACGAGCGCTACACCGAGCAGGAAGTGGACAATATGCTCAG
CCTTCTGTTGGAATACGGAAGCGATTCCCAGCTGACGATTTATCGACTTGAAGAATACGGGACTGAAATTATGGGCGACA
ATGCACTCGAAACGATCAAAACGTATTTTCCAGCCTTATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

59.556

99.558

0.593

Multiple sequence alignment