Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   A7J09_RS05885 Genome accession   NZ_CP030015
Coordinates   1225629..1226294 (-) Length   221 a.a.
NCBI ID   WP_029178420.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1220629..1231294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS05865 (A7J09_05970) - 1221279..1221800 (+) 522 WP_002935005.1 AAA family ATPase -
  A7J09_RS05870 (A7J09_05975) xerS 1221967..1223037 (+) 1071 WP_002935006.1 tyrosine recombinase XerS Machinery gene
  A7J09_RS05875 (A7J09_05980) - 1223107..1224615 (-) 1509 WP_013730362.1 phosphoglucomutase -
  A7J09_RS05880 (A7J09_05985) - 1224691..1225632 (-) 942 WP_002935009.1 sensor histidine kinase -
  A7J09_RS05885 (A7J09_05990) braR 1225629..1226294 (-) 666 WP_029178420.1 DNA-binding response regulator Regulator
  A7J09_RS05890 (A7J09_05995) - 1226333..1226539 (-) 207 WP_370287028.1 type II toxin-antitoxin system RelE family toxin -
  A7J09_RS05895 (A7J09_06000) relB 1226580..1226819 (-) 240 WP_002935014.1 type II toxin-antitoxin system RelB family antitoxin -
  A7J09_RS05900 (A7J09_06005) - 1226911..1228881 (-) 1971 WP_029174755.1 FtsX-like permease family protein -
  A7J09_RS05905 (A7J09_06010) - 1228882..1229634 (-) 753 WP_011922409.1 ABC transporter ATP-binding protein -
  A7J09_RS05910 (A7J09_06015) - 1229770..1230504 (-) 735 WP_011922410.1 ABC transporter permease -
  A7J09_RS05915 (A7J09_06020) - 1230506..1231252 (-) 747 WP_029178419.1 ABC transporter permease -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25443.32 Da        Isoelectric Point: 4.8781

>NTDB_id=257965 A7J09_RS05885 WP_029178420.1 1225629..1226294(-) (braR) [Streptococcus suis strain ISU2812]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDVFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFSNELEQVQLSPTETKILS
ALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=257965 A7J09_RS05885 WP_029178420.1 1225629..1226294(-) (braR) [Streptococcus suis strain ISU2812]
ATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAGCATTTGGGAAAATCGTA
TCAGGTGGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTCGCTGAAATCAAACCAGACTTGGTGCTGATGGACA
TTAGCCTGCCTTATTACAACGGTTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCC
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGTTTTTGTGTCTAAGCCGTTTTCTCTGGG
GATTTTGGATGCCAAAATCGGCGCCTTCTTGCGTCGGGTTAATCAATTCAGCAAATCAACTGATTTGTCAATTGACCAGT
TCCAACTTAGTTTAGACGGGCGATTTTCAAACGAATTGGAACAGGTTCAATTGTCTCCTACGGAAACCAAGATTTTGTCC
GCCTTACTAGAAAGACAAGGGCAGATTGTCAGCAAGGAAGAACTCCTGGAAAAACTCTGGGAAAATGAAGAATTTATTGA
CCAGAACACGCTCAATGTCAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACGGTTC
GTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)

Response regulator receiver domain (Response_reg)

(6-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.818

99.548

0.466