Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CWR44_RS02670 Genome accession   NZ_CP025031
Coordinates   535731..536399 (-) Length   222 a.a.
NCBI ID   WP_016930642.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SGAir0252     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 530731..541399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWR44_RS02655 (CWR44_02655) - 531908..533899 (-) 1992 WP_011274733.1 ABC transporter permease -
  CWR44_RS02660 (CWR44_02660) - 533901..534650 (-) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  CWR44_RS02665 (CWR44_02665) braS 534832..535728 (-) 897 WP_011274731.1 sensor histidine kinase Regulator
  CWR44_RS02670 (CWR44_02670) braR 535731..536399 (-) 669 WP_016930642.1 response regulator transcription factor Regulator
  CWR44_RS13200 - 536429..536593 (-) 165 WP_011274729.1 hypothetical protein -
  CWR44_RS13265 - 536779..536949 (-) 171 WP_169301455.1 hypothetical protein -
  CWR44_RS02675 (CWR44_02675) - 537348..538817 (+) 1470 WP_053035080.1 alkaline phosphatase -
  CWR44_RS02680 (CWR44_02680) - 538958..539905 (-) 948 WP_053035081.1 LCP family protein -
  CWR44_RS02685 (CWR44_02685) wecB 540000..541139 (-) 1140 WP_053035082.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25695.51 Da        Isoelectric Point: 4.6536

>NTDB_id=257482 CWR44_RS02670 WP_016930642.1 535731..536399(-) (braR) [Staphylococcus haemolyticus strain SGAir0252]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=257482 CWR44_RS02670 WP_016930642.1 535731..536399(-) (braR) [Staphylococcus haemolyticus strain SGAir0252]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77

Multiple sequence alignment