Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CKO49_RS10225 | Genome accession | NZ_CP025023 |
| Coordinates | 2088472..2088867 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932697.1 | Uniprot ID | A0A7U7PX14 |
| Organism | Staphylococcus argenteus strain XNO106 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2083472..2093867
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKO49_RS10200 (CKO49_10200) | thiE | 2084077..2084718 (-) | 642 | WP_031787699.1 | thiamine phosphate synthase | - |
| CKO49_RS10205 (CKO49_10205) | thiM | 2084720..2085511 (-) | 792 | WP_031787700.1 | hydroxyethylthiazole kinase | - |
| CKO49_RS10210 (CKO49_10210) | thiD | 2085495..2086325 (-) | 831 | WP_031787701.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CKO49_RS10215 (CKO49_10215) | tenA | 2086322..2087008 (-) | 687 | WP_031787702.1 | thiaminase II | - |
| CKO49_RS10220 (CKO49_10220) | sceD | 2087388..2088080 (-) | 693 | WP_031787703.1 | lytic transglycosylase SceD | - |
| CKO49_RS10225 (CKO49_10225) | ssb | 2088472..2088867 (-) | 396 | WP_000932697.1 | single-stranded DNA-binding protein | Machinery gene |
| CKO49_RS10230 (CKO49_10230) | - | 2089061..2089501 (+) | 441 | WP_000846749.1 | YwpF-like family protein | - |
| CKO49_RS10235 (CKO49_10235) | fabZ | 2089558..2089998 (-) | 441 | WP_000447680.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CKO49_RS10240 (CKO49_10240) | murA | 2090032..2091297 (-) | 1266 | WP_000358013.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CKO49_RS10245 (CKO49_10245) | - | 2091409..2091642 (-) | 234 | WP_000384521.1 | DUF1146 family protein | - |
| CKO49_RS10255 (CKO49_10255) | - | 2091974..2092378 (-) | 405 | WP_001094393.1 | F0F1 ATP synthase subunit epsilon | - |
| CKO49_RS10260 (CKO49_10260) | atpD | 2092398..2093810 (-) | 1413 | WP_000511140.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15016.10 Da Isoelectric Point: 5.2398
>NTDB_id=257250 CKO49_RS10225 WP_000932697.1 2088472..2088867(-) (ssb) [Staphylococcus argenteus strain XNO106]
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSHNIDNPDLLEI
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSHNIDNPDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=257250 CKO49_RS10225 WP_000932697.1 2088472..2088867(-) (ssb) [Staphylococcus argenteus strain XNO106]
ATGCTAAACAAAATCGTAATAGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGTGTTGCAACACAACGAAATTATAAAGATGAAAACGGAGAAATCGTTTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGCTAGCGTCAAACATTGATAAGTACACCAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACACACTTTGTTACAGAATTATATGTTGAAACTATAAAATTCATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCATAATATAGATAATCCTGACTTATTAGAAATTTAA
ATGCTAAACAAAATCGTAATAGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGTGTTGCAACACAACGAAATTATAAAGATGAAAACGGAGAAATCGTTTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGCTAGCGTCAAACATTGATAAGTACACCAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACACACTTTGTTACAGAATTATATGTTGAAACTATAAAATTCATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCATAATATAGATAATCCTGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
93.893 |
100 |
0.939 |
| ssb | Staphylococcus aureus MW2 |
93.13 |
100 |
0.931 |