Detailed information NTG0257107

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: CWD84_RS16090
• Genome accession: NZ_CP025001
• Coordinates: 3153818..3154771 (-)
• Length: 317 a.a.
• NCBI ID: WP_060963098.1
• Uniprot ID: A0AAI8HQ13
• Organism: Bacillus siamensis strain SCSIO 05746
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3148818..3159771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWD84_RS16060 (CWD84_16060)	-	3148947..3149933 (-)	987	WP_060963094.1	ABC transporter ATP-binding protein	-
CWD84_RS16065 (CWD84_16065)	-	3150106..3150891 (-)	786	WP_060963095.1	DUF2268 domain-containing protein	-
CWD84_RS16070 (CWD84_16070)	fabF	3150976..3152214 (-)	1239	WP_060965052.1	beta-ketoacyl-ACP synthase II	-
CWD84_RS16075 (CWD84_16075)	-	3152238..3153176 (-)	939	WP_060963096.1	beta-ketoacyl-ACP synthase III	-
CWD84_RS16080 (CWD84_16080)	-	3153342..3153584 (+)	243	WP_060963097.1	hypothetical protein	-
CWD84_RS16085 (CWD84_16085)	comZ	3153614..3153805 (-)	192	WP_003155061.1	ComZ family protein	Regulator
CWD84_RS16090 (CWD84_16090)	med	3153818..3154771 (-)	954	WP_060963098.1	BMP family ABC transporter substrate-binding protein	Regulator
CWD84_RS16095 (CWD84_16095)	-	3154860..3155426 (-)	567	WP_060963099.1	hypothetical protein	-
CWD84_RS16100 (CWD84_16100)	-	3155509..3156242 (-)	734	Protein_3183	hypothetical protein	-
CWD84_RS16110 (CWD84_16110)	-	3156504..3156689 (+)	186	WP_016938251.1	YjzD family protein	-
CWD84_RS16115 (CWD84_16115)	-	3156726..3156905 (-)	180	WP_016938252.1	YjzC family protein	-
CWD84_RS16120 (CWD84_16120)	argF	3156982..3157953 (-)	972	WP_060963100.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35300.98 Da
• Isoelectric Point: 4.7229

>NTDB_id=257107 CWD84_RS16090 WP_060963098.1 3153818..3154771(-) (med) [Bacillus siamensis strain SCSIO 05746]
MITRLVMVFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVISVHLIGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYKKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTIIAEQYNNGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=257107 CWD84_RS16090 WP_060963098.1 3153818..3154771(-) (med) [Bacillus siamensis strain SCSIO 05746]
TTGATCACCAGGCTTGTCATGGTCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGGAAAAT
TGAGAAGGTCGGAATGCTGTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGTAAGGATTA
TCCCGACATGGAATTCGTCGTCGCTAACGGAACGGCGAAAAACGATAATGTCATAAGCGTTCATCTTATAGGAGAAGCGA
TGGGCTTTTTTGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTTTTATGGCAG
CCTGAGGTAGACGGCTTTATTAAAGGGGCAAAATATGAAAAGCCCGATATTACCGTCAATACTGAATTTACGGACCATTG
GGATAACGGCAATGAAGCACTGCATCTTTATAAGAAGTTAAAAGCAGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATTAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAACCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCCTATACAATAATCGCCGAGCAATATAATAACGG
CACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	77.603	100	0.776