Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CWD84_RS16085 Genome accession   NZ_CP025001
Coordinates   3153614..3153805 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus siamensis strain SCSIO 05746     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3148614..3158805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWD84_RS16060 (CWD84_16060) - 3148947..3149933 (-) 987 WP_060963094.1 ABC transporter ATP-binding protein -
  CWD84_RS16065 (CWD84_16065) - 3150106..3150891 (-) 786 WP_060963095.1 DUF2268 domain-containing protein -
  CWD84_RS16070 (CWD84_16070) fabF 3150976..3152214 (-) 1239 WP_060965052.1 beta-ketoacyl-ACP synthase II -
  CWD84_RS16075 (CWD84_16075) - 3152238..3153176 (-) 939 WP_060963096.1 beta-ketoacyl-ACP synthase III -
  CWD84_RS16080 (CWD84_16080) - 3153342..3153584 (+) 243 WP_060963097.1 hypothetical protein -
  CWD84_RS16085 (CWD84_16085) comZ 3153614..3153805 (-) 192 WP_003155061.1 ComZ family protein Regulator
  CWD84_RS16090 (CWD84_16090) med 3153818..3154771 (-) 954 WP_060963098.1 BMP family ABC transporter substrate-binding protein Regulator
  CWD84_RS16095 (CWD84_16095) - 3154860..3155426 (-) 567 WP_060963099.1 hypothetical protein -
  CWD84_RS16100 (CWD84_16100) - 3155509..3156242 (-) 734 Protein_3183 hypothetical protein -
  CWD84_RS16110 (CWD84_16110) - 3156504..3156689 (+) 186 WP_016938251.1 YjzD family protein -
  CWD84_RS16115 (CWD84_16115) - 3156726..3156905 (-) 180 WP_016938252.1 YjzC family protein -
  CWD84_RS16120 (CWD84_16120) argF 3156982..3157953 (-) 972 WP_060963100.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=257106 CWD84_RS16085 WP_003155061.1 3153614..3153805(-) (comZ) [Bacillus siamensis strain SCSIO 05746]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=257106 CWD84_RS16085 WP_003155061.1 3153614..3153805(-) (comZ) [Bacillus siamensis strain SCSIO 05746]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTTATGGATCTATTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment