Detailed information NTG0257079

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: CWD84_RS09010
• Genome accession: NZ_CP025001
• Coordinates: 1657312..1659663 (+)
• Length: 783 a.a.
• NCBI ID: WP_060964715.1
• Uniprot ID: A0AAI8HMV4
• Organism: Bacillus siamensis strain SCSIO 05746
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1652312..1664663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWD84_RS08970 (CWD84_08970)	yhbY	1652586..1652876 (+)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
CWD84_RS08975 (CWD84_08975)	-	1652887..1653456 (+)	570	WP_016938889.1	nicotinate-nucleotide adenylyltransferase	-
CWD84_RS08980 (CWD84_08980)	yqeK	1653446..1654006 (+)	561	WP_060964711.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
CWD84_RS08985 (CWD84_08985)	rsfS	1654023..1654379 (+)	357	WP_016938891.1	ribosome silencing factor	-
CWD84_RS08990 (CWD84_08990)	-	1654376..1655113 (+)	738	WP_060964712.1	class I SAM-dependent DNA methyltransferase	-
CWD84_RS08995 (CWD84_08995)	comER	1655182..1656003 (-)	822	WP_060964713.1	late competence protein ComER	-
CWD84_RS09000 (CWD84_09000)	comEA	1656062..1656676 (+)	615	WP_060964714.1	helix-hairpin-helix domain-containing protein	Machinery gene
CWD84_RS09005 (CWD84_09005)	-	1656742..1657311 (+)	570	WP_016938895.1	ComE operon protein 2	-
CWD84_RS09010 (CWD84_09010)	comEC	1657312..1659663 (+)	2352	WP_060964715.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CWD84_RS09015 (CWD84_09015)	-	1659682..1659816 (-)	135	WP_003152870.1	YqzM family protein	-
CWD84_RS22095	-	1659857..1660011 (+)	155	Protein_1777	hypothetical protein	-
CWD84_RS09020 (CWD84_09020)	holA	1660051..1661092 (+)	1042	Protein_1778	DNA polymerase III subunit delta	-
CWD84_RS09025 (CWD84_09025)	rpsT	1661110..1661376 (-)	267	WP_003152876.1	30S ribosomal protein S20	-
CWD84_RS09030 (CWD84_09030)	gpr	1661579..1662685 (+)	1107	WP_060964717.1	GPR endopeptidase	-
CWD84_RS09035 (CWD84_09035)	spoIIP	1662753..1663946 (+)	1194	WP_060964718.1	stage II sporulation protein P	-
CWD84_RS09040 (CWD84_09040)	-	1663963..1664301 (+)	339	WP_016938900.1	YqxA family protein	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87150.01 Da
• Isoelectric Point: 9.1532

>NTDB_id=257079 CWD84_RS09010 WP_060964715.1 1657312..1659663(+) (comEC) [Bacillus siamensis strain SCSIO 05746]
MKYKYLLLPLAAVSATAGIAAANFFWVLFFFLLYLLFLFVKTKQYTPFIVSLVSFCLYFFLYTVCDAANVSRYQGGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKSLIEQLEPGMRCVFTGSLEQPGHATIPGGFDYKEHLNSQHI
HWLFSVTSIQQCEKSGMPLYKLLNIRKNLISIIQNHVPESSAGIVEALTLGERFSIEDDILNAYQNLGVVHLMAISGMHV
GLITAGIFYVLIRIGLTREKAGVLLLFFLPVYTLLSGAAPSVLRASLMLGFYIAGTLFKRRIHSSAALSVSYLLLLMFNP
YLLWQAGFQLSFAVSAALILSSSILKKAGKRRFAALAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLLSRQVGECLFYMFDLVMKPVHDFMTYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSP
LFFCAVLVYLMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVVAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHRVKRLIVPVGFVKEPKDQDILKMAKENNIPVAEAKRGDTITAGHLQFQVLSP
ESSDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKAYPNLKADILKAGHHGSKSSTSEAFLKQLQPEAALISAGE
DNRYHHPHEEVLDRLKAYSVNVLRTDLSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=257079 CWD84_RS09010 WP_060964715.1 1657312..1659663(+) (comEC) [Bacillus siamensis strain SCSIO 05746]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACCGCGGGAATTGCCGCCGCAAATTTCTTCTGGGT
TCTATTCTTTTTTCTTCTGTATCTTCTCTTTCTTTTTGTAAAAACAAAGCAGTACACACCGTTTATCGTCAGCCTCGTTT
CTTTTTGTCTTTATTTCTTTCTGTATACGGTTTGTGACGCTGCGAATGTATCCCGGTATCAGGGCGGGAGCTATACTGAA
CAGGCCGTCATCACAAATATTCCGAAGGTTGACGGGGCGAAAATGTCTGCCGTTATCCGAACGCATGACAAAGAAAAATG
GGCCGCTTCATACAAAATCCGGTCTCTTGAAGAAAAAAGTCTCATTGAACAGCTGGAACCGGGGATGCGCTGCGTGTTTA
CCGGCTCTTTGGAACAGCCCGGACATGCGACGATTCCCGGAGGTTTTGATTATAAGGAACATCTTAATTCTCAGCATATT
CACTGGTTATTTTCCGTGACTTCCATTCAGCAGTGTGAAAAATCCGGCATGCCGCTGTATAAATTGCTCAACATCAGAAA
GAATTTGATTTCGATCATTCAAAATCACGTGCCTGAATCCTCTGCCGGAATTGTAGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAACGCTTATCAAAATCTGGGAGTCGTTCATTTAATGGCCATTTCCGGAATGCATGTC
GGTCTGATTACCGCGGGAATATTTTATGTTCTGATCAGAATCGGGCTGACAAGAGAAAAGGCGGGGGTTTTGCTGCTGTT
TTTTTTACCGGTGTATACGCTGTTAAGCGGTGCGGCCCCGTCCGTATTGCGCGCATCTCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTTAAACGCAGAATTCATTCCTCGGCTGCATTGTCTGTGTCTTATCTGCTGCTCCTCATGTTTAATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCTTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAGAAGATTTGCCGCGCTAGCGATGGCCTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTGCTCTATC
ATTTTCAGCAGATTTCGCTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCGGTCATCGGTTTCCTTCTTCTCTTACTTTCAAGGCAGGTCGGGGAATGTTTGTTTTATATGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATGACGTATGCGGCATCCGTTGATTTATTTACAATGATTGTGTCAAAGCCTGACTTTCTTTCCC
TTCTTCTGCTTGCGGTTTCCGTGTTTACGCTATTTGCAGCTTTGGAAAAGGGCGGTTTTTTGAAACTCAGGAAATCGCCT
CTTTTTTTCTGCGCGGTTTTGGTTTATTTAATGTTCCGTCCTTATTTCAGTCCCTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCGCTGTTTATAAGTGCGCCGCACCGCAAAGGAACCGTAATGGTTGATACAGGGGGAGTGGTGGCTT
ATCCAGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGTGAGAAGGTTTTGATTCCGTTTTTGAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAGAGTCAAACGGCTGATTGTTCCCGTGGGATTCGTGAAGGAACCGAAGGATCAGGACATATTGAAGATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTCATCTTCAATTTCAGGTGCTGTCCCCG
GAGTCGTCTGACGGAAGAAGTAAAAACGATTCGTCACTGGTGCTTTGGACAGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACGGAAGTGCTGAAAGCGTATCCGAATCTGAAGGCTGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCGGCACTGATTTCAGCAGGTGAA
GATAATCGTTACCATCATCCGCATGAAGAGGTGCTGGATCGTTTGAAAGCGTACTCTGTCAATGTGCTTCGCACCGATCT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCTGTCTTTCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Domain of unknown function (DUF4131) (DUF4131) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.57	98.595	0.548