Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   CVO91_RS10815 Genome accession   NZ_CP024974
Coordinates   2118910..2120697 (-) Length   595 a.a.
NCBI ID   WP_002942321.1    Uniprot ID   A0A0Z8H8D9
Organism   Streptococcus suis strain CZ130302     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2113910..2125697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS10785 (CVO91_10785) - 2113911..2114276 (-) 366 WP_002939192.1 Asp23/Gls24 family envelope stress response protein -
  CVO91_RS10795 (CVO91_10795) - 2114715..2115617 (-) 903 WP_002942329.1 ABC transporter permease -
  CVO91_RS10800 (CVO91_10800) opp4B 2115631..2116587 (-) 957 WP_002942327.1 oligopeptide ABC transporter permease -
  CVO91_RS10805 (CVO91_10805) - 2116589..2117530 (-) 942 WP_002938145.1 ATP-binding cassette domain-containing protein -
  CVO91_RS10810 (CVO91_10810) - 2117533..2118531 (-) 999 WP_002942324.1 ABC transporter ATP-binding protein -
  CVO91_RS10815 (CVO91_10815) oppA 2118910..2120697 (-) 1788 WP_002942321.1 oligopeptide ABC transporter substrate-binding protein Regulator
  CVO91_RS10820 (CVO91_10820) pbp3 2120912..2122153 (+) 1242 WP_002942307.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  CVO91_RS10825 (CVO91_10825) sufB 2122491..2123906 (-) 1416 WP_002942303.1 Fe-S cluster assembly protein SufB -
  CVO91_RS10830 (CVO91_10830) sufU 2124147..2124587 (-) 441 WP_002942301.1 Fe-S cluster assembly sulfur transfer protein SufU -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 65739.48 Da        Isoelectric Point: 4.4587

>NTDB_id=256944 CVO91_RS10815 WP_002942321.1 2118910..2120697(-) (oppA) [Streptococcus suis strain CZ130302]
MKKTTKLFALAGVTLLSASVLAACGSKQSGAAKQELSFPSEVKQDGTAVADAQLKYAWVSPTTSSGLLIDELTENTTDST
FGGFVDIPLFGWDGDRKLDDSGLAKAEFDVKGKKITVSLTGKDYKWSDGEPFTINDYIFTIKSMASKDYTGVRFDDKFLN
IVGMDEFVAGTASDISGLKKIDDYTVELTVKEMSPSMMYAGGDVPSYIQPEHIYKDIPVADWEKSEYSRTAKLVGMGPWK
IKEIVNGESITYVPNEYYFKGQPKTSSLKVDIVSPDTIVSEMKAGNYDIAEMPVDQLDSYKDASNLNIVGRLDSAYEYIS
FNLGKYDESAKKNVMDENAKMNDVKLRQAIAYAIDTKTAGESLYNGLYHPANSLIISFFGDIHDSELEGYSYDPEKAKKL
LEEAGYKDVDGDGIREGKDGKEFKITFAARKRTEANEALVEQYIAWWKEVGLNVELYTGRTLEVNSFYDAIQANDPAIDM
YAGGWSTGYDPNPTGIWGPIAAFNMSRFVSDENTKLLNAISSTESFDDKKNVENYKAWQKYTHEQAFAIPTFESEKVTAL
NKRVKNYDSNYGSASGNGIAYEGIELTADKGVAAE

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=256944 CVO91_RS10815 WP_002942321.1 2118910..2120697(-) (oppA) [Streptococcus suis strain CZ130302]
ATGAAAAAGACAACGAAACTTTTTGCACTTGCAGGTGTGACTCTCCTTTCAGCATCTGTTCTTGCAGCATGTGGTTCAAA
ACAATCAGGTGCAGCAAAACAGGAATTGTCATTCCCATCTGAAGTAAAACAAGATGGAACAGCAGTCGCAGATGCTCAAT
TGAAATACGCATGGGTATCACCGACAACTTCATCAGGTCTCTTGATTGACGAGTTGACTGAAAATACAACTGACTCAACA
TTTGGTGGTTTTGTTGATATTCCACTTTTTGGTTGGGATGGTGATCGTAAGTTAGATGATTCTGGTCTTGCTAAAGCTGA
ATTTGATGTAAAAGGTAAGAAAATCACAGTTAGCTTGACAGGTAAAGACTACAAGTGGTCAGATGGTGAGCCATTCACAA
TCAACGACTACATCTTTACTATCAAGTCAATGGCAAGCAAAGACTATACAGGTGTTCGTTTTGATGATAAATTCTTGAAC
ATTGTGGGTATGGATGAATTTGTTGCTGGAACTGCTTCAGATATCTCAGGTCTTAAGAAAATTGATGATTATACAGTGGA
ATTGACTGTAAAAGAAATGTCACCTTCAATGATGTATGCGGGTGGTGATGTCCCATCCTATATCCAACCAGAACACATCT
ATAAAGATATCCCTGTTGCAGACTGGGAAAAGAGCGAGTACTCACGTACAGCTAAACTTGTAGGTATGGGACCTTGGAAG
ATCAAGGAAATTGTAAACGGTGAGTCAATCACTTACGTACCAAACGAATACTACTTCAAGGGACAACCAAAAACAAGCTC
ATTGAAGGTTGATATTGTATCTCCTGATACAATCGTTTCTGAAATGAAAGCTGGTAACTATGACATCGCAGAGATGCCTG
TTGACCAGTTGGATTCATACAAGGATGCTTCTAACTTGAATATCGTTGGTCGTTTAGACTCAGCTTATGAATATATCTCA
TTCAACCTTGGTAAATATGACGAGTCTGCTAAGAAAAACGTCATGGATGAAAATGCTAAGATGAATGATGTGAAACTTCG
TCAAGCGATTGCCTATGCGATTGATACCAAGACAGCTGGTGAGTCATTGTACAATGGTCTTTACCACCCTGCAAACTCAT
TGATTATCTCATTCTTCGGCGATATTCATGATTCAGAGTTGGAAGGCTATTCATACGATCCTGAAAAAGCGAAAAAACTC
TTGGAAGAAGCTGGCTACAAAGACGTAGATGGCGATGGTATCCGTGAAGGCAAAGACGGTAAGGAATTTAAGATTACCTT
TGCTGCTCGTAAACGTACTGAAGCCAACGAAGCGCTTGTAGAACAGTACATTGCTTGGTGGAAAGAAGTTGGCTTGAATG
TTGAACTTTACACAGGTCGTACACTTGAAGTCAACTCATTCTATGATGCAATTCAAGCAAACGACCCTGCAATTGATATG
TATGCTGGTGGTTGGTCAACAGGTTATGATCCAAACCCAACAGGTATTTGGGGTCCTATCGCTGCCTTCAATATGTCACG
TTTCGTGTCTGATGAAAATACTAAGTTGTTGAATGCAATCAGCTCAACAGAATCATTTGACGATAAGAAAAATGTTGAGA
ACTATAAGGCTTGGCAAAAATATACTCACGAGCAAGCATTTGCTATTCCAACATTTGAATCTGAAAAGGTTACAGCACTT
AACAAACGTGTGAAAAACTATGATTCTAACTATGGTTCAGCTTCAGGAAACGGTATTGCTTATGAGGGTATCGAACTTAC
AGCAGATAAAGGTGTAGCGGCAGAATAG

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(103-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8H8D9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

91.443

100

0.916

Multiple sequence alignment