Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   CV098_RS10940 Genome accession   NZ_CP024958
Coordinates   2244104..2245390 (-) Length   428 a.a.
NCBI ID   WP_010906325.1    Uniprot ID   A0A2A9HU85
Organism   Lactococcus lactis subsp. lactis strain G423     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2239104..2250390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CV098_RS10925 (CV098_10925) - 2240295..2240831 (-) 537 WP_017865163.1 hypothetical protein -
  CV098_RS10930 (CV098_10930) - 2240837..2242168 (-) 1332 WP_017865164.1 NAD(P)/FAD-dependent oxidoreductase -
  CV098_RS10935 (CV098_10935) - 2242184..2244034 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  CV098_RS10940 (CV098_10940) eeP 2244104..2245390 (-) 1287 WP_010906325.1 RIP metalloprotease RseP Regulator
  CV098_RS10945 (CV098_10945) - 2245409..2246212 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  CV098_RS10950 (CV098_10950) - 2246212..2246946 (-) 735 WP_003130589.1 isoprenyl transferase -
  CV098_RS10955 (CV098_10955) yajC 2247318..2247650 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  CV098_RS10960 (CV098_10960) - 2247745..2248443 (-) 699 WP_017865165.1 DNA alkylation repair protein -
  CV098_RS10965 (CV098_10965) rlmH 2248462..2248941 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46422.95 Da        Isoelectric Point: 6.5146

>NTDB_id=256834 CV098_RS10940 WP_010906325.1 2244104..2245390(-) (eeP) [Lactococcus lactis subsp. lactis strain G423]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=256834 CV098_RS10940 WP_010906325.1 2244104..2245390(-) (eeP) [Lactococcus lactis subsp. lactis strain G423]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCTGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGTCAAGCCGC
GAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(218-269)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A9HU85

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.613

100

0.57

  eeP Streptococcus thermophilus LMD-9

56.381

100

0.568


Multiple sequence alignment