Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | CV725_RS00275 | Genome accession | NZ_CP024951 |
| Coordinates | 62560..63135 (+) | Length | 191 a.a. |
| NCBI ID | WP_001203595.1 | Uniprot ID | K2JY70 |
| Organism | Helicobacter pylori B128 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57560..68135
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV725_RS00250 (CV725_00250) | uvrD | 58251..60296 (+) | 2046 | WP_000505301.1 | DNA helicase UvrD | - |
| CV725_RS00255 (CV725_00255) | flgA | 60293..60949 (+) | 657 | WP_000697649.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| CV725_RS00260 (CV725_00260) | - | 60959..61522 (+) | 564 | WP_000780113.1 | UbiX family flavin prenyltransferase | - |
| CV725_RS00265 (CV725_00265) | coaD | 61522..61995 (+) | 474 | WP_001169256.1 | pantetheine-phosphate adenylyltransferase | - |
| CV725_RS00270 (CV725_00270) | tmk | 61997..62572 (+) | 576 | WP_000289050.1 | dTMP kinase | - |
| CV725_RS00275 (CV725_00275) | comFC | 62560..63135 (+) | 576 | WP_001203595.1 | ComF family protein | Machinery gene |
| CV725_RS00280 (CV725_00280) | - | 63168..65207 (+) | 2040 | WP_001147711.1 | N-6 DNA methylase | - |
| CV725_RS08260 | - | 65204..66419 (+) | 1216 | Protein_56 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21324.87 Da Isoelectric Point: 8.6712
>NTDB_id=256631 CV725_RS00275 WP_001203595.1 62560..63135(+) (comFC) [Helicobacter pylori B128]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEQG
LNIPFYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGTLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKALNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEQG
LNIPFYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGTLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKALNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=256631 CV725_RS00275 WP_001203595.1 62560..63135(+) (comFC) [Helicobacter pylori B128]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCCTAAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAGGCCGGCAAAGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATATCCCCTTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGACTTTAAGGGCGACTAATGCCGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCTAACAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTACTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCCTAAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAGGCCGGCAAAGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATATCCCCTTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGACTTTAAGGGCGACTAATGCCGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCTAACAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTACTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.751 |
100 |
0.361 |