Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | CV726_RS00280 | Genome accession | NZ_CP024950 |
| Coordinates | 64523..65098 (+) | Length | 191 a.a. |
| NCBI ID | WP_145939845.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain B130A | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59523..70098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV726_RS00255 (CV726_00255) | uvrD | 60214..62259 (+) | 2046 | WP_194151657.1 | DNA helicase UvrD | - |
| CV726_RS00260 (CV726_00260) | flgA | 62256..62912 (+) | 657 | WP_145939843.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| CV726_RS00265 (CV726_00265) | - | 62922..63485 (+) | 564 | WP_120865682.1 | UbiX family flavin prenyltransferase | - |
| CV726_RS00270 (CV726_00270) | coaD | 63485..63958 (+) | 474 | WP_001169276.1 | pantetheine-phosphate adenylyltransferase | - |
| CV726_RS00275 (CV726_00275) | tmk | 63960..64535 (+) | 576 | WP_145939844.1 | dTMP kinase | - |
| CV726_RS00280 (CV726_00280) | comFC | 64523..65098 (+) | 576 | WP_145939845.1 | ComF family protein | Machinery gene |
| CV726_RS00285 (CV726_00285) | - | 65129..67165 (+) | 2037 | WP_145939846.1 | N-6 DNA methylase | - |
| CV726_RS00290 (CV726_00290) | - | 67162..68374 (+) | 1213 | Protein_56 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21366.92 Da Isoelectric Point: 8.6839
>NTDB_id=256613 CV726_RS00280 WP_145939845.1 64523..65098(+) (comFC) [Helicobacter pylori strain B130A]
MRCLTCLKLSFKPLCKNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEQG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGTLRATNTISYAGKSLEFRANNPRDFTFRGDENLDYFLLDDII
TTGTTLKEALKHLKALNIKAHFAIALCSVDE
MRCLTCLKLSFKPLCKNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEQG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGTLRATNTISYAGKSLEFRANNPRDFTFRGDENLDYFLLDDII
TTGTTLKEALKHLKALNIKAHFAIALCSVDE
Nucleotide
Download Length: 576 bp
>NTDB_id=256613 CV726_RS00280 WP_145939845.1 64523..65098(+) (comFC) [Helicobacter pylori strain B130A]
ATGCGTTGTTTAACCTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCAAAAATTGCCTAAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGATCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAGAATCTTACAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCTGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGACTTTAAGAGCCACAAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAGGGGCGATGAGAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACTTTAAAAGAAGCCCTAAAACACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGTGGATGAATGA
ATGCGTTGTTTAACCTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCAAAAATTGCCTAAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGATCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAGAATCTTACAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCTGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGACTTTAAGAGCCACAAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAGGGGCGATGAGAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACTTTAAAAGAAGCCCTAAAACACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGTGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
93.194 |
100 |
0.932 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.508 |
98.953 |
0.361 |