Detailed information NTG0256599

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CV727_RS05945
• Genome accession: NZ_CP024949
• Coordinates: 1217231..1218031 (-)
• Length: 266 a.a.
• NCBI ID: WP_145820939.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain B136A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1212231..1223031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV727_RS05900 (CV727_05900)	-	1213296..1214081 (-)	786	WP_145820926.1	hypothetical protein	-
CV727_RS05905 (CV727_05905)	-	1214081..1214462 (-)	382	Protein_1119	DUF1294 domain-containing protein	-
CV727_RS08555 (CV727_05915)	-	1214761..1214952 (-)	192	WP_227986161.1	lysozyme	-
CV727_RS05925 (CV727_05925)	-	1215278..1215838 (-)	561	WP_145820932.1	hypothetical protein	-
CV727_RS05930 (CV727_05930)	-	1215822..1216160 (-)	339	WP_145820934.1	hypothetical protein	-
CV727_RS05935 (CV727_05935)	-	1216345..1216698 (-)	354	WP_145820936.1	tetratricopeptide repeat protein	-
CV727_RS05940 (CV727_05940)	dprB	1216830..1217234 (-)	405	WP_145820937.1	Holliday junction resolvase RuvX	Machinery gene
CV727_RS05945 (CV727_05945)	dprA	1217231..1218031 (-)	801	WP_145820939.1	DNA-processing protein DprA	Machinery gene
CV727_RS05950 (CV727_05950)	minE	1218038..1218271 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
CV727_RS05955 (CV727_05955)	minD	1218268..1219074 (-)	807	WP_001019055.1	septum site-determining protein MinD	-
CV727_RS05960 (CV727_05960)	ilvC	1219098..1220090 (-)	993	WP_145821539.1	ketol-acid reductoisomerase	-
CV727_RS05970 (CV727_05970)	-	1220340..1221122 (+)	783	WP_145820941.1	NAD+ synthase	-
CV727_RS05975 (CV727_05975)	-	1221119..1222057 (+)	939	WP_145820943.1	tetraacyldisaccharide 4'-kinase	-
CV727_RS05980 (CV727_05980)	pseH	1221990..1222532 (-)	543	WP_145820945.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29772.68 Da
• Isoelectric Point: 8.5925

>NTDB_id=256599 CV727_RS05945 WP_145820939.1 1217231..1218031(-) (dprA) [Helicobacter pylori strain B136A]
MKSNFQYGALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=256599 CV727_RS05945 WP_145820939.1 1217231..1218031(-) (dprA) [Helicobacter pylori strain B136A]
ATGAAAAGTAATTTCCAATACGGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414