Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CV730_RS02465 | Genome accession | NZ_CP024946 |
| Coordinates | 502775..503179 (+) | Length | 134 a.a. |
| NCBI ID | WP_145728315.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain B147 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 497775..508179
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV730_RS02430 (CV730_02425) | - | 497953..498891 (-) | 939 | WP_145728311.1 | tetraacyldisaccharide 4'-kinase | - |
| CV730_RS02435 (CV730_02430) | - | 498888..499670 (-) | 783 | WP_145728312.1 | NAD+ synthase | - |
| CV730_RS02445 (CV730_02440) | ilvC | 499919..500911 (+) | 993 | WP_145728313.1 | ketol-acid reductoisomerase | - |
| CV730_RS02450 (CV730_02445) | minD | 500935..501741 (+) | 807 | WP_003014933.1 | septum site-determining protein MinD | - |
| CV730_RS02455 (CV730_02450) | minE | 501738..501971 (+) | 234 | WP_000051430.1 | cell division topological specificity factor MinE | - |
| CV730_RS02460 (CV730_02455) | dprA | 501978..502778 (+) | 801 | WP_145728314.1 | DNA-processing protein DprA | Machinery gene |
| CV730_RS02465 (CV730_02460) | dprB | 502775..503179 (+) | 405 | WP_145728315.1 | Holliday junction resolvase RuvX | Machinery gene |
| CV730_RS02470 (CV730_02465) | - | 503457..504317 (+) | 861 | WP_145729166.1 | tetratricopeptide repeat protein | - |
| CV730_RS02475 (CV730_02470) | - | 504446..504784 (+) | 339 | WP_145728316.1 | hypothetical protein | - |
| CV730_RS02480 (CV730_02475) | - | 504768..505328 (+) | 561 | WP_145728317.1 | hypothetical protein | - |
| CV730_RS02485 (CV730_02480) | - | 505411..506307 (-) | 897 | WP_145728318.1 | RluA family pseudouridine synthase | - |
| CV730_RS02490 (CV730_02485) | recJ | 506307..507857 (-) | 1551 | WP_145728319.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15254.67 Da Isoelectric Point: 8.2748
>NTDB_id=256541 CV730_RS02465 WP_145728315.1 502775..503179(+) (dprB) [Helicobacter pylori strain B147]
MILACDVGLKRIGIATLLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFIDEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIATLLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFIDEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=256541 CV730_RS02465 WP_145728315.1 502775..503179(+) (dprB) [Helicobacter pylori strain B147]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTACGCTTTTAAACGGCGTTATCTTGCCCTTAGAAGC
GATCTTACGCCAAAATAGGAATCAGGCTTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAACCCAATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTCATCAAGCTTGTAGATTTTAAGGGTGAA
ATCGTTTTTATTGATGAAGACAGATCCAGTATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTACGCTTTTAAACGGCGTTATCTTGCCCTTAGAAGC
GATCTTACGCCAAAATAGGAATCAGGCTTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAACCCAATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTCATCAAGCTTGTAGATTTTAAGGGTGAA
ATCGTTTTTATTGATGAAGACAGATCCAGTATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
96.269 |
100 |
0.963 |