Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CUC43_RS02285 | Genome accession | NZ_CP024771 |
| Coordinates | 387134..388177 (-) | Length | 347 a.a. |
| NCBI ID | WP_029439919.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis LM1212 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 382134..393177
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC43_RS02240 (CUC43_02330) | - | 382563..382763 (-) | 201 | WP_000106081.1 | YqzE family protein | - |
| CUC43_RS02245 (CUC43_02335) | aroK | 382802..383299 (-) | 498 | WP_029439912.1 | shikimate kinase AroK | - |
| CUC43_RS02250 (CUC43_02340) | - | 383418..384068 (-) | 651 | WP_029439913.1 | 2OG-Fe(II) oxygenase | - |
| CUC43_RS02255 (CUC43_02345) | comGG | 384244..384615 (-) | 372 | WP_029439914.1 | competence type IV pilus minor pilin ComGG | - |
| CUC43_RS02260 (CUC43_02350) | comGF | 384612..385082 (-) | 471 | WP_029439915.1 | competence type IV pilus minor pilin ComGF | - |
| CUC43_RS02265 (CUC43_02355) | comGE | 385052..385354 (-) | 303 | WP_029439916.1 | competence type IV pilus minor pilin ComGE | - |
| CUC43_RS02270 (CUC43_02360) | comGD | 385347..385802 (-) | 456 | WP_029439917.1 | comG operon protein ComGD | - |
| CUC43_RS02275 (CUC43_02365) | comGC | 385799..386098 (-) | 300 | WP_002194509.1 | comG operon protein ComGC | - |
| CUC43_RS02280 (CUC43_02370) | comGB | 386110..387141 (-) | 1032 | WP_029439918.1 | comG operon protein ComGB | - |
| CUC43_RS02285 (CUC43_02375) | comGA | 387134..388177 (-) | 1044 | WP_029439919.1 | competence protein ComGA | Machinery gene |
| CUC43_RS02290 (CUC43_02380) | - | 388383..389078 (+) | 696 | WP_029439920.1 | helix-turn-helix domain-containing protein | - |
| CUC43_RS02295 (CUC43_02385) | - | 389204..389446 (+) | 243 | WP_029439921.1 | DUF2626 domain-containing protein | - |
| CUC43_RS02300 (CUC43_02390) | - | 389554..390948 (+) | 1395 | WP_001094339.1 | L-cystine transporter | - |
| CUC43_RS02305 (CUC43_02395) | - | 391166..391573 (-) | 408 | WP_029439922.1 | hypothetical protein | - |
| CUC43_RS02310 (CUC43_02400) | - | 391661..391876 (-) | 216 | WP_001008328.1 | DUF3912 family protein | - |
| CUC43_RS02315 (CUC43_02405) | - | 392129..392440 (+) | 312 | WP_029439923.1 | hypothetical protein | - |
| CUC43_RS02320 (CUC43_02410) | - | 392477..392965 (-) | 489 | WP_029439924.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39136.51 Da Isoelectric Point: 8.9182
>NTDB_id=255343 CUC43_RS02285 WP_029439919.1 387134..388177(-) (comGA) [Bacillus thuringiensis LM1212]
MNGIESFANTILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRSDDLLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFIDFGITRQEIEQSLLAIAAQRLVELKCPFCNRKCSTLCKSMRQVRQASIYELLYGYELKQAIKGANGEC
VTSKHETLESSIRKGYALGFLEEDVYV
MNGIESFANTILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRSDDLLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFIDFGITRQEIEQSLLAIAAQRLVELKCPFCNRKCSTLCKSMRQVRQASIYELLYGYELKQAIKGANGEC
VTSKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=255343 CUC43_RS02285 WP_029439919.1 387134..388177(-) (comGA) [Bacillus thuringiensis LM1212]
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGACAGAAGGATGTAGTGGTTCAACTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCGCTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCTACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATCTACAAGCATCTATTCAGCCATTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACAACGATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGTATCGTTACACTGGAGGATCCAGTTGAAAAAAGAAGTGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGACATTTAGTAATGACGACACTGCAT
ACAAATGATGCGAGAGGGGCGATACTCAGGTTCATAGATTTTGGCATAACGAGGCAAGAGATTGAACAATCTTTATTAGC
TATAGCTGCACAGAGACTTGTCGAATTAAAGTGTCCGTTTTGTAACAGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGACAAGCGAGTATTTATGAGTTGTTATATGGATATGAATTAAAACAAGCGATTAAAGGAGCAAACGGGGAATGT
GTCACATCCAAGCATGAAACGTTAGAATCTTCGATAAGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGACAGAAGGATGTAGTGGTTCAACTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCGCTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCTACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATCTACAAGCATCTATTCAGCCATTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGTTCTGGGAAGACAACAACGATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGTATCGTTACACTGGAGGATCCAGTTGAAAAAAGAAGTGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGACATTTAGTAATGACGACACTGCAT
ACAAATGATGCGAGAGGGGCGATACTCAGGTTCATAGATTTTGGCATAACGAGGCAAGAGATTGAACAATCTTTATTAGC
TATAGCTGCACAGAGACTTGTCGAATTAAAGTGTCCGTTTTGTAACAGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGACAAGCGAGTATTTATGAGTTGTTATATGGATATGAATTAAAACAAGCGATTAAAGGAGCAAACGGGGAATGT
GTCACATCCAAGCATGAAACGTTAGAATCTTCGATAAGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.061 |
100 |
0.571 |