Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   DMB38_RS18805 Genome accession   NZ_CP029618
Coordinates   4332250..4333374 (-) Length   374 a.a.
NCBI ID   WP_047017067.1    Uniprot ID   -
Organism   Streptomyces sp. WAC 06738     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4327250..4338374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DMB38_RS18785 (DMB38_18775) - 4327745..4328458 (+) 714 WP_240662721.1 hypothetical protein -
  DMB38_RS18790 (DMB38_18780) - 4328540..4330411 (-) 1872 WP_125936164.1 BACON domain-containing protein -
  DMB38_RS18795 (DMB38_18785) - 4330485..4331063 (-) 579 WP_125936165.1 phosphatase PAP2 family protein -
  DMB38_RS18800 (DMB38_18790) - 4331191..4332063 (+) 873 WP_125936166.1 hypothetical protein -
  DMB38_RS18805 (DMB38_18795) disA 4332250..4333374 (-) 1125 WP_047017067.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  DMB38_RS18810 (DMB38_18800) radA 4333485..4334939 (-) 1455 WP_125936167.1 DNA repair protein RadA Machinery gene
  DMB38_RS18815 (DMB38_18805) ilvD 4335100..4336953 (+) 1854 WP_125936168.1 dihydroxy-acid dehydratase -
  DMB38_RS18820 (DMB38_18810) - 4337074..4337577 (+) 504 WP_125936169.1 hypothetical protein -
  DMB38_RS18825 (DMB38_18815) - 4337626..4338216 (-) 591 WP_125936170.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40221.89 Da        Isoelectric Point: 5.2143

>NTDB_id=255132 DMB38_RS18805 WP_047017067.1 4332250..4333374(-) (disA) [Streptomyces sp. WAC 06738]
MAAGDRAGAPGRAGGSSGSDAAVRAALSAVAPGTALRDGLERVLRGNTGGLIVLGTDKIIESICTGGFVLDVEFTATRLR
ELCKLDGAVVLDQDITRIERAGVQLLPDASIPTEETGTRHRTAQRVSIQSGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERQLVVRDYVPERTGRRPHTVDRALTELDRLSHGELLELPIVARSLGYSGVPETLDAAVSPRGYRLLAKVPRIPSA
VIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=255132 DMB38_RS18805 WP_047017067.1 4332250..4333374(-) (disA) [Streptomyces sp. WAC 06738]
GTGGCAGCAGGCGACCGGGCGGGCGCCCCGGGCAGAGCCGGCGGCAGTTCCGGCTCCGATGCCGCGGTGAGGGCCGCGCT
GAGCGCGGTCGCGCCCGGCACCGCGCTCCGCGACGGCCTGGAGCGGGTCCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TGGGCACGGACAAGATCATCGAGTCCATCTGCACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACCAGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGCCGTGGTCCTCGACCAGGACATCACGCGGATCGAGCGCGCGGGTGTGCAGTTGCTGCC
CGACGCCTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGCAGCGGGTGTCGATCCAGAGCGGCTTCCCCG
TCGTCTCCGTCAGCCAGTCGATGCGGCTCATCGCGCTGTACGTCGACGGCCAGCGGCGCGTGCTGGAGGACTCCGCCGCG
ATCCTCTCCCGGGCGAACCAGGCGCTGGCCACCCTGGAGCGGTACAAACTCCGGCTGGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCCGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACGGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAGCCGGAACGCCAGCTCGTCGTCAGGGACTACGTGCCGGAGCGCACCGGACGCCGCCCGCACACCGTGGACCG
CGCCCTCACCGAGCTGGACCGGCTCTCCCACGGTGAGCTGCTCGAACTGCCCATCGTGGCCCGCTCGCTGGGCTACTCGG
GCGTGCCCGAGACCCTCGACGCCGCGGTCTCGCCGCGGGGTTACCGGCTGCTGGCCAAGGTGCCGCGCATCCCCAGCGCC
GTCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCCCGCTCGGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.402

93.048

0.422