Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   DMA15_RS20850 Genome accession   NZ_CP029617
Coordinates   4613686..4614810 (-) Length   374 a.a.
NCBI ID   WP_125514300.1    Uniprot ID   -
Organism   Streptomyces sp. WAC 01529     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4608686..4619810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DMA15_RS20830 (DMA15_20815) - 4609384..4610997 (+) 1614 WP_240659879.1 histidine kinase -
  DMA15_RS20835 (DMA15_20820) vraR 4610994..4611662 (+) 669 WP_276314360.1 response regulator transcription factor Regulator
  DMA15_RS20840 (DMA15_20825) - 4611961..4612560 (-) 600 Protein_4097 phosphatase PAP2 family protein -
  DMA15_RS20845 - 4612744..4613571 (+) 828 WP_125514299.1 hypothetical protein -
  DMA15_RS20850 (DMA15_20840) disA 4613686..4614810 (-) 1125 WP_125514300.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  DMA15_RS20855 (DMA15_20845) radA/sms 4614890..4616299 (-) 1410 WP_125514301.1 DNA repair protein RadA Machinery gene
  DMA15_RS20860 (DMA15_20850) - 4616547..4618433 (+) 1887 WP_240659880.1 hypothetical protein -
  DMA15_RS20865 (DMA15_20855) - 4618504..4619298 (-) 795 WP_346428949.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40348.26 Da        Isoelectric Point: 5.0058

>NTDB_id=255052 DMA15_RS20850 WP_125514300.1 4613686..4614810(-) (disA) [Streptomyces sp. WAC 01529]
MAANDRAANPGKPGGSSAADALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILNVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALQELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=255052 DMA15_RS20850 WP_125514300.1 4613686..4614810(-) (disA) [Streptomyces sp. WAC 01529]
GTGGCAGCCAACGACCGGGCAGCGAATCCCGGCAAGCCCGGCGGAAGCTCCGCTGCCGATGCGCTGATGCGCGCCTCCCT
GAGCGCCGTCGCCCCCGGCACGGCCCTGCGCGACGGCCTGGAGCGCATCCTGCGCGGCAACACCGGCGGCCTGATCGTCC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCATCCTGAACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACATCACCAAGATCCTCCGCGCCGGTGTGCAGCTGGTGCC
GGACCCGATGATCCCCACCGAGGAGACCGGCACGCGGCACCGCACGGCGGACCGCGTCTCCAAGCAGGTCGGTTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGCCTGATCGCGCTGTACGTGGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGGTACAAGCTGCGTCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCGGTCGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGCCTTCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCCGAGCGCGAGCTGGTCGTCAGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGTACGGTCGACGA
GGCGCTCCAGGAGCTGGACGCCCTCACCCACGCGGAGCTGCTCGAACTGTCCACCGTGGCGCGCGCCTTGGGTTACACGG
GCTCTCCGGAGGCCCTGGACTCGGCCGTCTCCCCGCGCGGCTTCCGCCTGCTCGCGAAGGTCCCCCGCCTCCCCGGCGCC
ATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGATCTCCAGACGGTGGA
CGGCGTGGGCGAGGCCAGGGCGCGCAGCGTCCGCGAGGGCCTGTCGCGCCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438