Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CSW12_RS20820 | Genome accession | NZ_CP024655 |
| Coordinates | 4030794..4031837 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013187.1 | Uniprot ID | - |
| Organism | Bacillus cereus strain MLY1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4025794..4036837
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSW12_RS20780 (CSW12_20830) | comGG | 4026407..4026778 (-) | 372 | WP_023523011.1 | competence type IV pilus minor pilin ComGG | - |
| CSW12_RS20785 (CSW12_20835) | - | 4026775..4026864 (-) | 90 | Protein_3998 | type IV pilus minor pilin ComGF family protein | - |
| CSW12_RS20790 (CSW12_20840) | - | 4026976..4028085 (+) | 1110 | WP_100909858.1 | IS110 family transposase | - |
| CSW12_RS20795 (CSW12_20845) | - | 4028437..4028742 (-) | 306 | Protein_4000 | ComGF family competence protein | - |
| CSW12_RS20800 (CSW12_20850) | - | 4028712..4029014 (-) | 303 | WP_000829462.1 | hypothetical protein | - |
| CSW12_RS20805 (CSW12_20855) | comGD | 4029007..4029462 (-) | 456 | WP_000813141.1 | competence type IV pilus minor pilin ComGD | - |
| CSW12_RS20810 (CSW12_20860) | comGC | 4029459..4029758 (-) | 300 | WP_001178687.1 | competence type IV pilus major pilin ComGC | - |
| CSW12_RS20815 (CSW12_20865) | comGB | 4029770..4030801 (-) | 1032 | WP_090977070.1 | competence type IV pilus assembly protein ComGB | - |
| CSW12_RS20820 (CSW12_20870) | comGA | 4030794..4031837 (-) | 1044 | WP_001013187.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CSW12_RS20825 (CSW12_20875) | - | 4032043..4032738 (+) | 696 | WP_000434107.1 | helix-turn-helix transcriptional regulator | - |
| CSW12_RS20830 (CSW12_20880) | - | 4032865..4033107 (+) | 243 | WP_000375619.1 | DUF2626 domain-containing protein | - |
| CSW12_RS20835 (CSW12_20885) | - | 4033215..4034609 (+) | 1395 | WP_100910400.1 | L-cystine transporter | - |
| CSW12_RS32350 (CSW12_20890) | - | 4034827..4035099 (-) | 273 | WP_332872760.1 | hypothetical protein | - |
| CSW12_RS20845 (CSW12_20895) | - | 4035169..4035384 (-) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| CSW12_RS20850 (CSW12_20900) | - | 4035638..4035949 (+) | 312 | WP_001093240.1 | hypothetical protein | - |
| CSW12_RS20855 (CSW12_20905) | - | 4035984..4036472 (-) | 489 | WP_141541665.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39164.52 Da Isoelectric Point: 8.5432
>NTDB_id=254830 CSW12_RS20820 WP_001013187.1 4030794..4031837(-) (comGA) [Bacillus cereus strain MLY1]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRVGKDLMTRHCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEDDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRVGKDLMTRHCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEDDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=254830 CSW12_RS20820 WP_001013187.1 4030794..4031837(-) (comGA) [Bacillus cereus strain MLY1]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTGTAGGAAAAGATTTAATGACGAGACATTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTCATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATAAGAAAAGGATATGCTTTAGGTTTTTTAGAAGATGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTGTAGGAAAAGATTTAATGACGAGACATTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTCATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATAAGAAAAGGATATGCTTTAGGTTTTTTAGAAGATGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.196 |
100 |
0.562 |
| pilB | Haemophilus influenzae 86-028NP |
39.441 |
92.795 |
0.366 |