Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CSW12_RS05400 Genome accession   NZ_CP024655
Coordinates   1029431..1029607 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain MLY1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1024431..1034607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSW12_RS05380 (CSW12_05400) clpC 1024762..1027362 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  CSW12_RS05385 (CSW12_05405) - 1027401..1027583 (-) 183 WP_001211116.1 YjzD family protein -
  CSW12_RS05390 (CSW12_05410) - 1027740..1028474 (+) 735 WP_000028691.1 hydrolase -
  CSW12_RS05395 (CSW12_05415) - 1028504..1029376 (+) 873 WP_001986101.1 NAD-dependent epimerase/dehydratase family protein -
  CSW12_RS05400 (CSW12_05420) comZ 1029431..1029607 (+) 177 WP_001986215.1 ComZ family protein Regulator
  CSW12_RS05405 (CSW12_05425) fabH 1029998..1030930 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  CSW12_RS05410 (CSW12_05430) fabF 1030962..1032200 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  CSW12_RS05415 (CSW12_05435) - 1032307..1033095 (+) 789 WP_053565023.1 DUF2268 domain-containing protein -
  CSW12_RS05420 (CSW12_05440) - 1033240..1033986 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=254812 CSW12_RS05400 WP_001986215.1 1029431..1029607(+) (comZ) [Bacillus cereus strain MLY1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=254812 CSW12_RS05400 WP_001986215.1 1029431..1029607(+) (comZ) [Bacillus cereus strain MLY1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment