Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   DLM49_RS15820 Genome accession   NZ_CP029601
Coordinates   3564632..3565756 (+) Length   374 a.a.
NCBI ID   WP_125504973.1    Uniprot ID   -
Organism   Streptomyces sp. WAC 01438     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3559632..3570756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLM49_RS15805 (DLM49_15840) - 3559677..3560612 (+) 936 WP_125504970.1 hypothetical protein -
  DLM49_RS15810 (DLM49_15845) - 3561194..3562933 (-) 1740 WP_125504971.1 hypothetical protein -
  DLM49_RS15815 (DLM49_15850) radA 3563141..3564550 (+) 1410 WP_125504972.1 DNA repair protein RadA Machinery gene
  DLM49_RS15820 (DLM49_15855) disA 3564632..3565756 (+) 1125 WP_125504973.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  DLM49_RS15825 (DLM49_15860) - 3565772..3566617 (-) 846 WP_125504974.1 hypothetical protein -
  DLM49_RS15835 (DLM49_15870) - 3568534..3569469 (+) 936 WP_125504975.1 A/G-specific adenine glycosylase -
  DLM49_RS15840 (DLM49_15875) - 3569824..3570363 (+) 540 WP_125504976.1 SigE family RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40098.83 Da        Isoelectric Point: 5.2144

>NTDB_id=254712 DLM49_RS15820 WP_125504973.1 3564632..3565756(+) (disA) [Streptomyces sp. WAC 01438]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTTLRDGLERVLRGNTGGLIVLGSDKTVETLCSGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRARTVEEALHELNVLTHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=254712 DLM49_RS15820 WP_125504973.1 3564632..3565756(+) (disA) [Streptomyces sp. WAC 01438]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGCACCACCCTGCGTGACGGCTTGGAGCGCGTACTGCGCGGGAACACCGGCGGTCTCATCGTGC
TCGGTTCCGACAAGACCGTCGAGACGCTGTGCAGCGGCGGGTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCGTCCGACCTGTCGAAGATTCTGCGGGCCGGCGTCCAGCTGGTGCC
CGACCCCACCATTCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTGTCCCAGTCGATGCGCCTGATCGCGCTGTACGTCGACGGCCACCGGCGGGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCGCTGGCCACCCTCGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGTCGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACCGACGGGCGTCTCCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAACTGGTGGTGCGGGACTACGTGCCGGAGCCGACCGCCAAGCGCGCCCGCACGGTCGAGGA
GGCCCTGCACGAGCTGAACGTGCTCACGCACGCGGAGCTGCTGGAGCTGTCGACCGTGGCCCGTGCGCTCGGCTACACCG
GTTCGCCGGAGACCCTCGACTCGGCGGTGTCACCGCGCGGCTTCCGGCTGCTGGCGAAGGTACCGAGGCTGCCCGGCGCG
ATCATCGACCGTCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGATCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCGCGGAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGAGCTCGATCCTCGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.11

92.513

0.436