Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   CT113_RS01200 Genome accession   NZ_CP024635
Coordinates   227072..228349 (+) Length   425 a.a.
NCBI ID   WP_024525166.1    Uniprot ID   A0A0C1PVE3
Organism   Levilactobacillus brevis strain BDGP6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 222072..233349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CT113_RS01170 (CT113_01170) tsf 222510..223394 (+) 885 WP_011668023.1 translation elongation factor Ts -
  CT113_RS01175 (CT113_01175) pyrH 223541..224263 (+) 723 WP_011668022.1 UMP kinase -
  CT113_RS01180 (CT113_01180) frr 224266..224823 (+) 558 WP_021741162.1 ribosome recycling factor -
  CT113_RS01185 (CT113_01185) - 224850..225272 (+) 423 WP_011668021.1 hypothetical protein -
  CT113_RS01190 (CT113_01190) - 225375..226163 (+) 789 WP_024525165.1 isoprenyl transferase -
  CT113_RS01195 (CT113_01195) - 226185..226976 (+) 792 WP_021741164.1 phosphatidate cytidylyltransferase -
  CT113_RS01200 (CT113_01200) eeP 227072..228349 (+) 1278 WP_024525166.1 RIP metalloprotease RseP Regulator
  CT113_RS01205 (CT113_01205) - 228385..230094 (+) 1710 WP_024525167.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46042.32 Da        Isoelectric Point: 7.6007

>NTDB_id=254633 CT113_RS01200 WP_024525166.1 227072..228349(+) (eeP) [Levilactobacillus brevis strain BDGP6]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGTDEKVERINTSKKSTLFNGIPLEVTATDLENELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSTTKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAIT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=254633 CT113_RS01200 WP_024525166.1 227072..228349(+) (eeP) [Levilactobacillus brevis strain BDGP6]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCAATTGGGATGGGGCCAAAATTGGTTTACCATCGTGGCAAAGATGGCA
CGACCTACACACTACGGTTATTGCCAGTGGGCGGTTACGTCCGAATGGCGGGTGCCGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCTTGTACGTGGGCACTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACAGATCTAGAGAATGAATTGTGGATTGAGGGCTATGAAAATGGTGACGAGA
GTGCCATTAAGCGTTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGATGGTACGGAACTGCAAATTGCCCCTAAG
GACGTTCAATTTCAGTCGGCATCGTTAGGCCGGCGATTGATGACGAATTTCGCTGGGCCGATGAACAATATCTTATTAGC
GATTGTCACCTTTATGTTGATGTCCTTTGCCCAGGGGGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAAGCCGGCGTGAAGACCAACGATAAGATTACGGCAGTCAATGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACAGCGATTCAGCCATTGGCTAACAAGAAAACAACGCTGACGATTCAAAGAGGATCGACAACCAAACA
CATTACGGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATATTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGCTTGAATGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCAACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCAATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAACGTGGAAGCCGCAATTACG
TTGATTGGTGTGGGGTTCTTAGTTCTGCTCATGCTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C1PVE3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.941

100

0.489

  eeP Streptococcus thermophilus LMD-9

48.941

100

0.489


Multiple sequence alignment