Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CPZ93_RS26600 | Genome accession | NZ_CP024630 |
| Coordinates | 5627893..5628450 (+) | Length | 185 a.a. |
| NCBI ID | WP_003119423.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain PA59 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5622893..5633450
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ93_RS26580 (CPZ93_27215) | pilR | 5624169..5625506 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| CPZ93_RS26585 (CPZ93_27220) | thiO | 5625552..5626646 (-) | 1095 | WP_003123395.1 | glycine oxidase ThiO | - |
| CPZ93_RS26590 (CPZ93_27225) | - | 5626781..5627290 (+) | 510 | WP_003102595.1 | Tfp pilus assembly protein FimT/FimU | - |
| CPZ93_RS26595 (CPZ93_27230) | - | 5627396..5627902 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| CPZ93_RS26600 (CPZ93_27235) | pilV | 5627893..5628450 (+) | 558 | WP_003119423.1 | type 4a pilus minor pilin PilV | Machinery gene |
| CPZ93_RS26605 (CPZ93_27240) | pilW | 5628447..5629271 (+) | 825 | WP_003123396.1 | type 4a pilus minor pilin PilW | - |
| CPZ93_RS26610 (CPZ93_27245) | pilX | 5629268..5629855 (+) | 588 | WP_003112826.1 | type 4a pilus minor pilin PilX | - |
| CPZ93_RS26615 (CPZ93_27250) | pilY1 | 5629867..5633358 (+) | 3492 | WP_003123397.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20061.15 Da Isoelectric Point: 8.2255
>NTDB_id=254564 CPZ93_RS26600 WP_003119423.1 5627893..5628450(+) (pilV) [Pseudomonas aeruginosa strain PA59]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=254564 CPZ93_RS26600 WP_003119423.1 5627893..5628450(+) (pilV) [Pseudomonas aeruginosa strain PA59]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
99.459 |
100 |
0.995 |