Detailed information NTG0254521

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: CTT30_RS12695
• Genome accession: NZ_CP024627
• Coordinates: 2697577..2700963 (+)
• Length: 1128 a.a.
• NCBI ID: WP_252035320.1
• Uniprot ID: A0A9Q8XG39
• Organism: Vibrio coralliilyticus strain SCSIO 43001
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2692577..2705963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTT30_RS12675 (CTT30_12735)	erpA	2693048..2693389 (-)	342	WP_239837774.1	iron-sulfur cluster insertion protein ErpA	-
CTT30_RS12680 (CTT30_12740)	hemL	2693645..2694937 (+)	1293	WP_239875155.1	glutamate-1-semialdehyde 2,1-aminomutase	-
CTT30_RS12685 (CTT30_12750)	-	2695199..2696284 (+)	1086	WP_239837776.1	AI-2E family transporter	-
CTT30_RS12690 (CTT30_12755)	rsmC	2696362..2697384 (+)	1023	WP_252035319.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
CTT30_RS12695 (CTT30_12760)	chiS	2697577..2700963 (+)	3387	WP_252035320.1	response regulator	Regulator
CTT30_RS12700 (CTT30_12765)	-	2701649..2703331 (+)	1683	WP_239865205.1	ABC transporter substrate-binding protein	-
CTT30_RS12705 (CTT30_12770)	-	2703503..2704489 (+)	987	WP_239865206.1	ABC transporter permease	-
CTT30_RS12710 (CTT30_12775)	-	2704492..2705517 (+)	1026	WP_239865207.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127364.07 Da
• Isoelectric Point: 5.9081

>NTDB_id=254521 CTT30_RS12695 WP_252035320.1 2697577..2700963(+) (chiS) [Vibrio coralliilyticus strain SCSIO 43001]
MFKLYRKQKFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLLSVRDSKQQQVVDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDIEQARDYAQRRYIQGSGDQIKTSILPQSKVYSGTERYRLLHKRYHRAYLELLKRSDF
DDVLLVDLEGNVTYSIYKHDNYGTNLLTGRFRDSNLGKTFHKLKTQVTEKRKTNEDYTPVIISDFEMDKGKPVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHRSRTMAYEQEDIDKSREVVDLALSGRTEVGTYINTVGEA
TIAAYSPISFKGVEWAIVVEVPEKEAFARVNQLETLFIFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAVSFERMQRSIRDKMQLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITASHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSSHLVGNKPIRI
INQVPTDPLWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPADQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASVEQIAQINDIENAHFVAPESNNLELIESSNLPENPE
GPLLLIVDDEPVNLRVLDSFLRLEGYRVRTANNGEEAIGSVREEKPELLLLDIMMPGMSGYQVCETLRQDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQNELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKVRFTNDAASRLFKRTTEQLRRSSADELIAPKYLNVEQPHYCGVIDIYVEDVRQHLSADILKLPEGS
GLKSMYIFDVGGGVNAARITNLETAIEALSSYAFEGDKAKLQELKELGGEFTRLADRVTTDNKSKQEIMREVLVDSMTSA
LNYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIENLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=254521 CTT30_RS12695 WP_252035320.1 2697577..2700963(+) (chiS) [Vibrio coralliilyticus strain SCSIO 43001]
ATGTTTAAGTTGTATCGAAAACAAAAATTCAAGCGCCTGCAACATACTTTGATGCTAGCGTTTTTGGTGCTCAGCATTAC
CCCTCTCACCATTATCGCTATCTTCTTTTTACAATCTCACACCAAAGATCTGCAAGAACAAAGCACTTCGCACTTGCTCT
CAGTACGCGACAGCAAACAGCAACAAGTCGTCGATTATATGTATGCAAAAGAATCTGAAGTCATGGGGTTCGTTCGTTCA
GAATTGGCTTATGCGAGCGGTGGACGCTTTTATGGATTGGTCAATGCTTTTCGTAGCTTAGGGTTAGATATTGAACAAGC
ACGTGACTACGCCCAACGACGTTATATTCAAGGTTCAGGCGATCAAATAAAAACATCCATTCTTCCTCAGTCTAAGGTTT
ATAGTGGTACTGAACGCTACCGCCTACTGCATAAACGCTACCATCGTGCTTACCTAGAGCTTCTCAAACGCTCTGACTTT
GACGACGTCCTCCTAGTTGATTTAGAAGGTAATGTCACCTATTCGATCTACAAACACGATAACTACGGTACTAACCTCCT
CACTGGTCGTTTCCGCGATAGCAACCTAGGCAAAACTTTCCATAAGCTCAAAACTCAAGTCACCGAAAAGCGTAAGACCA
ATGAAGATTATACCCCTGTTATCATTTCTGATTTTGAAATGGATAAAGGGAAACCCGTTGCTTGGCTAGGTGCGCCCATA
ATTCAGCAAGGTTACCTCCATAGCTATGCCATGTTCCGCTTACCGAATAATGGCATCACTAAGCTGATCGCTGATACCAA
CAATGCTTCAGCTATGAAAACCTTGTTGGTAGGTGCCGACCATCGTTCACGCACCATGGCTTATGAGCAAGAAGACATCG
ACAAAAGTCGCGAAGTCGTAGACTTAGCGCTATCAGGAAGAACGGAAGTAGGTACTTACATCAATACAGTTGGAGAAGCG
ACTATTGCCGCTTACAGCCCGATATCTTTCAAAGGTGTAGAATGGGCAATTGTGGTTGAAGTTCCAGAAAAAGAAGCCTT
TGCTCGAGTGAATCAGCTCGAAACCCTCTTCATCTTCGCCATGTTATGTGCAATTGTACTGGTAGTCGCGGCATCGCATT
ACTTATCCAACTTTATTACCGCACCGCTTCTTAAGTTGACTTGGGCTGCAGAGAAAGTCTCAGCTGGCGACCTTGACACC
GATATCATCAATACTGAGCGTAAAGATGAAATTGGTCGTCTCGCGGTGAGCTTTGAACGTATGCAACGCTCCATCCGTGA
CAAAATGCAGCTCATCAAACAGCAAAATGAAGAACTGGAAAGCAATCTAAAACTGATTCAGAAGCAAAATGATGAATTAC
AGCTAGCCAACAAACTCAAAGACGAGTTTCTTGCCACAACTTCCCATGAATTACGCACGCCTTTGCATGGCATGGTTGGG
ATTGCCGAAGCCCTGATTTCAGGTGCGAATGGCCCCATCACCGCCAGCCACAAATATCAACTTGATATCATCATCAGTAG
TGGTCAAAGGCTGGCAACCTTAGTCGATGATTTACTTGATTATCACAAAATGCGTTATGGTAATCTGGATATCGAAACCC
GCGCAGTGGACATTTCTGGCGCAACACGATTGGTTTTGGAGCTGTCTTCTCACCTTGTCGGTAACAAGCCAATTCGCATT
ATCAACCAAGTTCCTACCGATCCTCTTTGGGTCAGTGCGGATCCACAACGTCTTGAGCAGGTACTGTATAACTTGGTTGG
CAATGCCATTAAGTACACCAGTGAAGGCAAAATCGTCATATCTGCCACTCAGGTTGATGATAATATCCGCGTACAAGTTG
TCGATACTGGCCAAGGTATACCAGCCGATCAACTGGAACATATCTTTGAGCCACTCATTCAAGCGGGTAGCGACAGCAGC
CGCTATCGACAAGGGGCAGGGTTAGGCCTATCCATTAGCCGACAGTTAATTGATTTGATGCAAGGTACGCTCTATGTGAG
CAGCCAGCCAATGGTCGGCACCACTTTCAGCTTCACTCTACCAATCGCATCAGTAGAGCAGATCGCTCAAATCAACGATA
TTGAGAACGCTCACTTCGTTGCACCGGAGAGCAATAATCTTGAACTCATAGAGAGTTCAAATTTGCCTGAAAACCCCGAA
GGGCCATTGTTATTGATTGTGGATGACGAACCGGTCAACCTACGTGTGTTAGACAGCTTCCTCCGTTTAGAAGGTTACCG
AGTACGTACGGCTAACAATGGGGAAGAAGCGATTGGCTCAGTTCGAGAAGAGAAGCCCGAACTTTTATTGCTCGATATCA
TGATGCCGGGTATGAGCGGCTATCAAGTGTGCGAAACGCTTCGACAAGATTACGACCACGCTCAATTACCTGTCATTATG
CTGACTGCATTAAATCAGCCTGACGATCGTGTACGTGGTTTTGAAGCCGGAGCGAACGATTACTTATCAAAGCCATTCAA
TAAACAGGAACTCGCCGCTCGAATAACCGCACACTTAACCGCCAGTAAGGCGGAGCAGCGCAGAATTGAAAATCAACAAT
TACAAAATGAGCTTAAACAGCGCGCCATGGTTGAAGCTAGCCTGCTGGAAACCCAAGGACGATTACTAGAACAGTTAGAG
TCTGCCCCAGAAGCTATTATCTGTGTGCGTGATGATAATAAAGTCCGTTTCACCAATGACGCGGCCTCAAGACTATTTAA
GCGCACAACCGAGCAGCTTAGACGCTCCAGCGCCGATGAACTTATCGCACCCAAATACCTTAATGTAGAACAGCCGCATT
ATTGTGGAGTCATTGATATATACGTGGAAGATGTTCGTCAGCATTTATCTGCGGATATTCTAAAGCTTCCCGAGGGATCT
GGGCTGAAATCCATGTATATTTTCGATGTCGGTGGTGGTGTGAATGCAGCACGCATTACCAATCTTGAAACAGCCATTGA
AGCGCTTTCCAGCTATGCCTTCGAAGGCGACAAAGCCAAACTTCAGGAATTAAAAGAACTCGGAGGTGAGTTCACACGCT
TGGCCGACCGCGTCACAACGGATAATAAGTCCAAACAGGAAATTATGCGTGAAGTATTGGTCGATTCCATGACAAGTGCC
CTGAATTACTGGGAAAGTGTCACGGGCCAAAGTAAGTTTGCATTTGCAGAGCAAAGTGGTTTGTGGCGAGTGTACCTTGA
CCGCAGTACATTACAAACTCGAACTCTAGATAAATATCTACGAGTCGAGACGTTGCCTAAAACACCTCGCTGGCGAACCG
TGTTGAGCTCATTAGAGTACATTTTGGAACACTGTAAAGAGATGAGCCCTGAGCGAACCCATATTGAAAACCTTCGTGAC
AAGCTTCAACACCTTCTCACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	78.901	100	0.789