Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   CTZ23_RS03985 Genome accession   NZ_CP024620
Coordinates   810925..815415 (+) Length   1496 a.a.
NCBI ID   WP_045796320.1    Uniprot ID   -
Organism   Acinetobacter indicus strain SGAir0564     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 805925..820415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTZ23_RS03960 (CTZ23_03970) - 806419..806970 (-) 552 WP_225876431.1 hypothetical protein -
  CTZ23_RS03965 (CTZ23_03975) pilG 807342..807725 (+) 384 WP_045796318.1 twitching motility response regulator PilG Regulator
  CTZ23_RS03970 (CTZ23_03980) - 807742..808110 (+) 369 WP_005179539.1 response regulator -
  CTZ23_RS03975 (CTZ23_03985) - 808114..808650 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  CTZ23_RS03980 (CTZ23_03990) - 808696..810768 (+) 2073 WP_045796319.1 methyl-accepting chemotaxis protein -
  CTZ23_RS03985 (CTZ23_03995) chpA 810925..815415 (+) 4491 WP_045796320.1 Hpt domain-containing protein Regulator
  CTZ23_RS03990 (CTZ23_04000) - 815412..815873 (+) 462 WP_045796321.1 hypothetical protein -
  CTZ23_RS03995 (CTZ23_04005) dapE 815942..817075 (-) 1134 WP_045796331.1 succinyl-diaminopimelate desuccinylase -
  CTZ23_RS04000 (CTZ23_04010) - 817202..817348 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  CTZ23_RS04005 (CTZ23_04015) - 817449..818351 (-) 903 WP_104988307.1 DUF1853 family protein -
  CTZ23_RS04010 (CTZ23_04020) - 818442..818831 (+) 390 WP_104988308.1 YbaN family protein -
  CTZ23_RS04015 (CTZ23_04025) elsL 818828..819358 (+) 531 WP_005179524.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1496 a.a.        Molecular weight: 166843.40 Da        Isoelectric Point: 4.2953

>NTDB_id=254430 CTZ23_RS03985 WP_045796320.1 810925..815415(+) (chpA) [Acinetobacter indicus strain SGAir0564]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATTVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAVDTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNNSTGMDRIYQTFNTAWQN
YGFSLEDVDESMKPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIYDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSPETDTTEAVTETAEA
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTATLNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASIALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDAAALEFELEPAPAETAYAVPEDEQQPDISSEPVLEDVPTLAEQTIPTDAVSATNDSEDNLH
SIVEESFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSNA
YDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNATDLLAPSKTFEFVQGDGAEPPSMQGEWSETA
QLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSRY
TDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVR
QTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTDD
GKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGTT
FSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSNI
AHSLPVLLIKGNTGQTIALLVDQLIGSHGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHVM
EPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHH
DIHRDLPIIMITSRTGEKHRERAFSLGVSHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4491 bp        

>NTDB_id=254430 CTZ23_RS03985 WP_045796320.1 810925..815415(+) (chpA) [Acinetobacter indicus strain SGAir0564]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACTTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGTTTGACCTTGTCAGCGCAGGTGCAGCA
GTTTGCAACCACGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCTCAGCCGATGGCACTGGACC
TGCGTCCATTGGTGCTGTTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCCTTAGAAGAACTTCTACAACTG
GCGAGCAGCTTAACATCCAGCGACAGTATTACTGGTCTAGAGTTTGATACAGCAAGCACTGATGAGCAGGTTGCTGTAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACGGTGGACCGCTTCCTGGCACACGATGAGCTGAAAACCCAGGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCTTGTTGCAGGATGAAATTGAATCGACCTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGAG
ATTATCTGCATCTGTTGCCACAGAATAACAGTACCGGCATGGACCGGATTTATCAGACCTTCAATACTGCATGGCAGAAC
TACGGCTTTAGCCTGGAAGATGTCGATGAGTCAATGAAACCGCAAGGTTTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTACTCGATGCCGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTACTGGTAGAGCGTACCGATAACCGTGCCTCTCAGGGTATTTATGATTTTACCCAGGAATTACAACTGGCC
TATGCAGCCTTGCTGGACAAGCCAAGCCTGCTGCACAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAGGATGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCCCAGAAACTGATACCACAGAAGCTGTAACCGAAACGGCTGAAGCC
GGTGCAGGGCTGAATCTGGCTGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGACAGCGCTGAGGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTCACGGGTATTGACCAGGATGTTAATA
GCTGGAGCCAAGATCCGAGCAATACTGCTACGCTGAACAATCTGATGCGCCATCTGCACACCTTAAAAGGTGGCGCCAAC
ATGATTGCGGCTAGCCATATTGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAGATGAG
CGCATCGATCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AAGTCGATTATCCGGCGCAGGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCACTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCAGCTGCACTTGAGTTTGAGCT
GGAACCAGCACCTGCAGAAACAGCCTATGCTGTGCCTGAAGATGAGCAGCAGCCAGATATTAGCAGCGAACCGGTACTGG
AAGATGTACCGACCCTGGCCGAGCAAACCATCCCTACAGACGCGGTATCTGCTACAAATGACAGCGAAGATAATCTGCAT
TCGATCGTGGAAGAAAGCTTCCTGGAAGAAGCCGAAGAGCTGCTCGACACTACAGAAAGCCTGTTAAAGCAGTGGTTTGA
CCATCGTAGTGACCGGAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGTCTGAAAGGCGGCGCGCGTATGGCCGAAA
TCGAGCCGGTGGCCGTGATTGCCTATCAGTTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCCAATGCC
TATGATGCCTTGCTCAACACCACTGTGGCCTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGACAGCCT
GAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTTAATGCCACCGATCTGCTGG
CACCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACTGCA
CAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTCTCGGGTGAAAACGC
GATTAACCGTTCGCGAATCGAGATGGAGCTGGGGCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAACGTC
TGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGCGATGAACATTCACGCTAT
ACCGACTTCGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGCGTCGGA
TTTGGTGGATTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAGTCGCGGATTCAGG
CAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTGCGT
CAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTGCACAATACCGAAGGCGAGCTGGACCGGACCATTCTGGA
ACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGTCTGGAAGATGCCGCTGTACGTAAACAGG
CAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGATGAT
GGTAAAGGAATTGATGAAACCAAGATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAACAGCAGCTGGACAA
GAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAAATTTCGGGTCGTGGCGTCG
GTCTGGACGTGGTGCAAAGCGAAATTAAGGCACTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACTACT
TTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCCTGATGGTAAAAGTTGGCGATCAGCAGTTCGCGATTCC
ATTGGCGCAAATTGACCGTATTGTACGAATTTCGCCTTCTGCACTGGAAAGTTACTTCAGCAGTAAAGATGACTACTTCA
AGATTGATCAGCAGAACTATAAGTTGCGCTATCTGTCCGAGTTTGTCGCCAACCAGCCATTGCCGCGTTTAAGCAATATC
GCGCATTCATTGCCGGTGCTGCTGATTAAGGGCAATACCGGTCAGACCATTGCCTTATTGGTCGATCAGCTGATTGGTTC
GCATGGCCAGATTGTGATGAAACCGATTGGTCAGCAGTTCTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTCTCGGTG
ATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCATGTGATG
GAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTAATGATTGTGGATGACTCGGTGACCGTACGTAAGGTCAC
GTCACGTCTGCTCGAGCGTCAGGGCTTTGATGTCGTCACCGCCAAAGACGGTGTTGATGCGATTGAGCAGCTGGAAAATG
TTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGTTTTGAGGTGACCAACCTGGTACGCCACCAT
GACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTTGGG
GGTATCGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTGAGG
CTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.99

100

0.618


Multiple sequence alignment