Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   SAOUHSC_00961 Genome accession   NC_007795
Coordinates   938930..939460 (-) Length   176 a.a.
NCBI ID   YP_499514.1    Uniprot ID   Q2FZN9
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 933930..944460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_00959 - 935435..936793 (+) 1359 YP_499512.1 hypothetical protein -
  SAOUHSC_00960 - 936932..938443 (+) 1512 YP_499513.1 hypothetical protein -
  SAOUHSC_00961 comK/comK1 938930..939460 (-) 531 YP_499514.1 hypothetical protein Regulator
  SAOUHSC_00962 - 939709..939927 (+) 219 YP_499515.1 hypothetical protein -
  SAOUHSC_00963 - 940008..940994 (-) 987 YP_499516.1 lipoyltransferase and lipoate-protein ligase -
  SAOUHSC_00964 - 941193..941369 (+) 177 YP_499517.1 hypothetical protein -
  SAOUHSC_00965 - 941384..941986 (+) 603 YP_499518.1 hypothetical protein -
  SAOUHSC_00966 - 942257..942364 (+) 108 YP_499519.1 hypothetical protein -
  SAOUHSC_00967 - 942903..943004 (+) 102 YP_499520.1 hypothetical protein -

Sequence

Protein


Download         Length: 176 a.a.        Molecular weight: 21033.02 Da        Isoelectric Point: 9.5420

>NTDB_id=25435 SAOUHSC_00961 YP_499514.1 938930..939460(-) (comK/comK1) [Staphylococcus aureus subsp. aureus NCTC 8325]
MVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPILLTPLFPTYFFPTH
SDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKAT
LNVFEALTRYSLFEDK

Nucleotide


Download         Length: 531 bp        

>NTDB_id=25435 SAOUHSC_00961 YP_499514.1 938930..939460(-) (comK/comK1) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAACGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCA
AAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCAAATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGA
CAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTACTAACACCATTATTTCCAACTTATTTTTTCCCAACACAT
TCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTATATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAA
AGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTTCATACCACAGTTTATGGCATCAATATAACAATTCCATTT
TTTACTATTACATGGTAGATAAACAATCTCGCATGATATCAAAAAATCCCGACCAACCAATAGATTATAATAAAGCCACA
TTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGAAGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(1-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FZN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1
  comK/comK1 Staphylococcus aureus N315

100

100

1

Multiple sequence alignment