Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   SAOUHSC_00936 Genome accession   NC_007795
Coordinates   908438..909424 (+) Length   328 a.a.
NCBI ID   YP_499489.1    Uniprot ID   Q2G1U4
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 903438..914424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_00931 - 903651..904613 (+) 963 YP_499484.1 oligopeptide ABC transporter permease -
  SAOUHSC_00932 - 904625..905506 (+) 882 YP_499485.1 oligopeptide ABC transporter permease -
  SAOUHSC_00933 - 905548..906537 (-) 990 YP_499486.1 tryptophanyl-tRNA synthetase -
  SAOUHSC_00934 spxA 906832..907227 (+) 396 YP_499487.1 transcriptional regulator Spx -
  SAOUHSC_00935 - 907598..908317 (+) 720 YP_499488.1 adaptor protein MecA -
  SAOUHSC_00936 coiA 908438..909424 (+) 987 YP_499489.1 hypothetical protein Machinery gene
  SAOUHSC_00937 - 909472..911280 (+) 1809 YP_499490.1 oligoendopeptidase F -
  SAOUHSC_00938 - 911740..912546 (-) 807 YP_499491.1 hypothetical protein -
  SAOUHSC_00939 - 912569..912886 (-) 318 YP_499492.1 hypothetical protein -
  SAOUHSC_00940 - 913038..913631 (-) 594 YP_499493.1 hypothetical protein -
  SAOUHSC_00941 - 913817..914164 (+) 348 YP_499494.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38840.52 Da        Isoelectric Point: 9.7121

>NTDB_id=25434 SAOUHSC_00936 YP_499489.1 908438..909424(+) (coiA) [Staphylococcus aureus subsp. aureus NCTC 8325]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDK
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=25434 SAOUHSC_00936 YP_499489.1 908438..909424(+) (coiA) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTATTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAAA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2G1U4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

99.085

100

0.991
  coiA Staphylococcus aureus N315

97.866

100

0.979

Multiple sequence alignment