Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CTZ18_RS10480 | Genome accession | NZ_CP024612 |
| Coordinates | 2173269..2173649 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Ab4653 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2168269..2178649
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTZ18_RS10450 (CTZ18_10420) | tadA | 2168387..2168890 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| CTZ18_RS10455 (CTZ18_10425) | - | 2168897..2170021 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CTZ18_RS10460 (CTZ18_10430) | ung | 2170018..2170731 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| CTZ18_RS10465 (CTZ18_10435) | - | 2170782..2171378 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CTZ18_RS10470 (CTZ18_10440) | gspK | 2171609..2172568 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| CTZ18_RS10475 (CTZ18_10445) | xcpW | 2172568..2173269 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CTZ18_RS10480 (CTZ18_10450) | xcpV | 2173269..2173649 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CTZ18_RS10485 (CTZ18_10455) | - | 2173639..2174193 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| CTZ18_RS10490 (CTZ18_10460) | - | 2174203..2174811 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| CTZ18_RS10495 (CTZ18_10465) | - | 2174849..2175622 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| CTZ18_RS10500 (CTZ18_10470) | - | 2175640..2175981 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| CTZ18_RS10505 (CTZ18_10475) | - | 2175993..2176973 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| CTZ18_RS10510 (CTZ18_10480) | kdsB | 2176985..2177746 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=254303 CTZ18_RS10480 WP_000836911.1 2173269..2173649(-) (xcpV) [Acinetobacter baumannii strain Ab4653]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=254303 CTZ18_RS10480 WP_000836911.1 2173269..2173649(-) (xcpV) [Acinetobacter baumannii strain Ab4653]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |