Detailed information NTG0254302

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CTZ18_RS10475
• Genome accession: NZ_CP024612
• Coordinates: 2172568..2173269 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain Ab4653
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2167568..2178269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTZ18_RS10445 (CTZ18_10415)	-	2167874..2168317 (-)	444	WP_001246675.1	SRPBCC family protein	-
CTZ18_RS10450 (CTZ18_10420)	tadA	2168387..2168890 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
CTZ18_RS10455 (CTZ18_10425)	-	2168897..2170021 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
CTZ18_RS10460 (CTZ18_10430)	ung	2170018..2170731 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
CTZ18_RS10465 (CTZ18_10435)	-	2170782..2171378 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
CTZ18_RS10470 (CTZ18_10440)	gspK	2171609..2172568 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
CTZ18_RS10475 (CTZ18_10445)	xcpW	2172568..2173269 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CTZ18_RS10480 (CTZ18_10450)	xcpV	2173269..2173649 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
CTZ18_RS10485 (CTZ18_10455)	-	2173639..2174193 (-)	555	WP_000841373.1	type II secretion system protein	-
CTZ18_RS10490 (CTZ18_10460)	-	2174203..2174811 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
CTZ18_RS10495 (CTZ18_10465)	-	2174849..2175622 (-)	774	WP_000497298.1	TatD family hydrolase	-
CTZ18_RS10500 (CTZ18_10470)	-	2175640..2175981 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
CTZ18_RS10505 (CTZ18_10475)	-	2175993..2176973 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
CTZ18_RS10510 (CTZ18_10480)	kdsB	2176985..2177746 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=254302 CTZ18_RS10475 WP_000594589.1 2172568..2173269(-) (xcpW) [Acinetobacter baumannii strain Ab4653]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=254302 CTZ18_RS10475 WP_000594589.1 2172568..2173269(-) (xcpW) [Acinetobacter baumannii strain Ab4653]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996