Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | DKY66_RS04275 | Genome accession | NZ_CP029561 |
| Coordinates | 761588..762184 (+) | Length | 198 a.a. |
| NCBI ID | WP_000966735.1 | Uniprot ID | Q3K1U0 |
| Organism | Streptococcus agalactiae strain 32790-3A | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 756588..767184
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKY66_RS04260 (DKY66_04255) | tpiA | 757772..758530 (+) | 759 | WP_000087883.1 | triose-phosphate isomerase | - |
| DKY66_RS04265 (DKY66_04260) | - | 758707..759399 (+) | 693 | WP_000240135.1 | phosphoglycerate mutase | - |
| DKY66_RS04270 (DKY66_04265) | pbp2b | 759528..761573 (+) | 2046 | WP_000934664.1 | penicillin-binding protein PBP2B | - |
| DKY66_RS04275 (DKY66_04270) | recR | 761588..762184 (+) | 597 | WP_000966735.1 | recombination mediator RecR | Machinery gene |
| DKY66_RS04280 (DKY66_04275) | - | 762325..763371 (+) | 1047 | WP_000032513.1 | D-alanine--D-alanine ligase | - |
| DKY66_RS04285 (DKY66_04280) | murF | 763518..764885 (+) | 1368 | WP_000777522.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| DKY66_RS04290 (DKY66_04285) | - | 765072..766292 (+) | 1221 | WP_000793475.1 | OFA family MFS transporter | - |
| DKY66_RS04295 (DKY66_04290) | - | 766421..767107 (+) | 687 | WP_000569012.1 | YwaF family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21619.82 Da Isoelectric Point: 4.5632
>NTDB_id=254294 DKY66_RS04275 WP_000966735.1 761588..762184(+) (recR) [Streptococcus agalactiae strain 32790-3A]
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=254294 DKY66_RS04275 WP_000966735.1 761588..762184(+) (recR) [Streptococcus agalactiae strain 32790-3A]
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
88.384 |
100 |
0.884 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
66.667 |
100 |
0.667 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |