Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DLJ52_RS07920 Genome accession   NZ_CP029559
Coordinates   1642266..1642931 (-) Length   221 a.a.
NCBI ID   WP_002960963.1    Uniprot ID   A0ABN5LKL2
Organism   Streptococcus sobrinus strain NIDR 6715-15     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1637266..1647931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ52_RS07895 (DLJ52_07895) - 1638864..1639334 (-) 471 WP_109982708.1 aromatic acid exporter family protein -
  DLJ52_RS10440 - 1639441..1639815 (+) 375 WP_029237840.1 DUF6442 family protein -
  DLJ52_RS07900 (DLJ52_07900) - 1639850..1640161 (+) 312 WP_019781691.1 DUF6442 family protein -
  DLJ52_RS07905 (DLJ52_07905) - 1640166..1640372 (+) 207 WP_109982709.1 helix-turn-helix transcriptional regulator -
  DLJ52_RS07910 (DLJ52_07910) - 1640415..1641107 (-) 693 WP_301950684.1 SDR family NAD(P)-dependent oxidoreductase -
  DLJ52_RS07915 (DLJ52_07915) - 1641328..1642269 (-) 942 WP_002960965.1 HAMP domain-containing sensor histidine kinase -
  DLJ52_RS07920 (DLJ52_07920) braR 1642266..1642931 (-) 666 WP_002960963.1 response regulator transcription factor Regulator
  DLJ52_RS07925 (DLJ52_07925) - 1643040..1644995 (-) 1956 WP_109982711.1 FtsX-like permease family protein -
  DLJ52_RS07930 (DLJ52_07930) - 1644997..1645749 (-) 753 WP_002960959.1 ABC transporter ATP-binding protein -
  DLJ52_RS10675 (DLJ52_07935) - 1646097..1646195 (-) 99 Protein_1507 IS200/IS605 family transposase -
  DLJ52_RS10680 - 1646311..1646760 (-) 450 WP_162564130.1 hypothetical protein -
  DLJ52_RS07945 (DLJ52_07945) - 1646889..1647133 (-) 245 Protein_1509 ATP-binding protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25239.92 Da        Isoelectric Point: 4.9498

>NTDB_id=254121 DLJ52_RS07920 WP_002960963.1 1642266..1642931(-) (braR) [Streptococcus sobrinus strain NIDR 6715-15]
MAHQGKIFIVEDDPTIVKLLKDHLSTDYQVEASQNFRDVRREVEASQADLILMDITLPYFNGFYWTTEIRKTMTLPIIFI
SSSDDEMDMVMALNMGGDDFISKPFSLPLLDAKIQAFLRRAQLFTSDDFHLGDFTLSREGVLSNGSGQVSLSPTENKILI
ILLSHQNQVVSKEELLEKLWENENFIDQNTLSVNMTRLRKKVSPLGFEHIHTVRGVGYLLK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=254121 DLJ52_RS07920 WP_002960963.1 1642266..1642931(-) (braR) [Streptococcus sobrinus strain NIDR 6715-15]
ATGGCACATCAAGGGAAAATTTTTATTGTCGAAGATGATCCAACCATCGTCAAGCTGCTTAAGGACCACCTGTCTACCGA
CTATCAGGTGGAAGCCAGTCAAAATTTTCGGGATGTCCGCAGAGAGGTCGAAGCCAGCCAAGCAGATTTGATCTTGATGG
ATATTACTCTGCCTTATTTCAATGGCTTTTATTGGACAACAGAGATTCGTAAGACCATGACCCTACCCATCATTTTTATC
TCCTCCAGCGATGATGAGATGGATATGGTCATGGCTCTCAATATGGGCGGTGATGACTTTATTTCTAAACCCTTCTCCCT
GCCTCTTCTGGATGCTAAGATTCAAGCCTTTCTCCGTCGGGCCCAGCTCTTTACCAGCGATGATTTTCATTTGGGAGATT
TTACTCTTAGCCGAGAAGGAGTTCTCTCAAATGGTTCAGGTCAAGTCAGCCTGTCGCCAACGGAAAATAAGATTTTGATT
ATTCTTCTTTCCCATCAAAATCAGGTGGTTTCTAAGGAGGAACTCTTAGAAAAGCTCTGGGAAAATGAAAATTTTATTGA
CCAGAATACCCTCAGTGTCAATATGACTCGCTTAAGAAAGAAGGTCAGCCCACTGGGCTTTGAGCATATTCACACCGTGA
GAGGAGTTGGCTATCTACTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.643

0.466
  micA Streptococcus pneumoniae Cp1015

34.934

100

0.362