Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   DKG71_RS23935 Genome accession   NZ_CP029541
Coordinates   5594834..5595958 (-) Length   374 a.a.
NCBI ID   WP_026170238.1    Uniprot ID   A0A640THM3
Organism   Streptomyces sp. NEAU-S7GS2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5589834..5600958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG71_RS23915 (DKG71_23915) - 5590169..5591803 (+) 1635 WP_109891724.1 GAF domain-containing protein -
  DKG71_RS23920 (DKG71_23920) - 5591912..5592613 (-) 702 WP_109891726.1 response regulator transcription factor -
  DKG71_RS23925 (DKG71_23925) - 5592896..5594224 (+) 1329 WP_109891728.1 globin domain-containing protein -
  DKG71_RS23930 (DKG71_23930) - 5594393..5594809 (+) 417 WP_202466676.1 pyridoxamine 5'-phosphate oxidase family protein -
  DKG71_RS23935 (DKG71_23935) disA 5594834..5595958 (-) 1125 WP_026170238.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  DKG71_RS23940 (DKG71_23940) radA 5596084..5597496 (-) 1413 WP_018093005.1 DNA repair protein RadA Machinery gene
  DKG71_RS23945 (DKG71_23945) - 5597747..5599498 (+) 1752 WP_109891730.1 sigma-70 family RNA polymerase sigma factor -
  DKG71_RS23950 (DKG71_23950) - 5599550..5600422 (-) 873 WP_109891732.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40289.13 Da        Isoelectric Point: 4.9306

>NTDB_id=254011 DKG71_RS23935 WP_026170238.1 5594834..5595958(-) (disA) [Streptomyces sp. NEAU-S7GS2]
MAANDRASTPGRSGGSSSTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALAELDALSHTELLELPIVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGT
VIDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=254011 DKG71_RS23935 WP_026170238.1 5594834..5595958(-) (disA) [Streptomyces sp. NEAU-S7GS2]
GTGGCAGCCAACGACCGGGCATCGACTCCCGGCAGGTCCGGTGGCAGTTCCTCCACCGAGAGCCTGATGCGCGCCTCACT
GAGCGCCGTCGCGCCCGGTACGGCCCTGCGCGACGGACTGGAACGCATCCTCCGCGGCAACACCGGCGGACTGATCGTGC
TGGGCTTCGACAAGACCGTCGAGACCATGTGCACCGGCGGTTTCGTCCTCGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGTGCGCTGGTCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGAGTCCAGCTGGTCCC
GGACGCCTCCATCCCGACGGAGGAGACCGGCACCCGCCACCGCACCGCCCAGCGCGTCTCCATCCAGGCCGGCTTCCCGG
TCGTCTCCGTCAGCCAGTCGATGCGCCTGATCGCCCTCTACGTCGACGGCGAGCGCCGCGTCCTGGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACTTGGTCACGGTCCGCGATGTCACCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAGCTCGGCACGGACGGCCGGCTGCTCGCCCTCCAGCTGGAGGAGCTGATCGCC
GGCGTGGAGCCCGAGCGGGAGCTGGTCGTCCGCGACTACGTCCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGCCGA
GGCGCTCGCCGAGCTGGACGCCCTCAGCCACACCGAGCTCCTCGAACTCCCCATCGTGGCCCGCGCGCTGGGCTACAGCG
GCGCCCCCGAGACCCTGGACTCCGCGGTCTCACCGCGCGGCTTCCGCCTGCTGGCGAAGGTCCCCCGGCTGCCCGGCACG
GTCATCGACCGCCTCGTCGACCACTTCGGCGGCCTGCAGAAGCTCCTCGCGGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCACGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A640THM3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

92.513

0.422